Gene Gbem_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2859 
Symbol 
ID6779711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3289975 
End bp3291240 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content62% 
IMG OID642768853 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_002139659 
Protein GI197119232 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000208534 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATGT CAGCTTCTTT CAAGGACCGC CTGTTCCCCC GCATCCCGCA GATCCAGCAG 
CACTTCCAGA CCCCGTTCCA CATCTACGAT GAATCCGGCA TCAGGGAAAC CGGCGCGCAG
CTGGTCAAGG CCTTCTCCGG CATCCCCGGG TTCCGCGAGT TCTTTGCGGT AAAGGCGCTT
CCCAACCGCG AAATTCTGAA GCTCATGAAA GAGATGGGCT TCGGTTTCGA CTGCAGCTCC
ATTCCCGAGG TGATCCTCGC CCGCGAACTC GGGGCAAGGC CTGAAGACAT CATGTTCACC
TCCAACAACA CCAGCCAGGA AGAGTTCGAT TTCGCTACCC AGGACGGCGG GTGCATCATG
AACCTCGACG ACATCTCCCT CATCGAAAAG GTGCCGCACT TCCCGGAGAT GATCTGCTTC
CGCTACAACC CGGGACCGCG CCGCACCGGC AACGTGATCA TCGGCAACCC CGAAGAGGCG
AAGTACGGCG TTTCGCACGA ACAGGTCGTA GAGGCCTACC GCCAGGCGAA GGAGCGCGGC
GCCACCCGCT TCGGCCTGCA CACCATGGTA GCCTCCAACG AGCTGGACTA CACCTACATC
GTCGAGACCG CGCGCATGGT ACTCGAGGTA GCCGAGGAAG TCGAAGCTGC TTTGGGCATC
AAGTTCGAGT TCGTCAACAT CGGCGGCGGC TTCGGCATCC CCTATCGTCC GGAACAAAAG
ACGCTCGATC TGGCCAGGAT GTCGGCCGAG GTCACCGAGC TCTTCGACGG CTTCCGCAAG
CGCCACGGCC ACGCACCCGC GATGTTCATG GAAAGCGGCC GCTTCATGAC CGGCCCCCAC
GGCGCCCTGG TCACTACCGC CATCAACAGC AAGGACACCT ACCGCAGGTA CATCGGCGTC
GACGCCTGTA TGTCCGCGCT GATGCGCCCT GCCCTTTACG GCGCCTACCA CCATATCGAC
GTCCTCGGCA AGGACCGGGA CCCGAAAACC GAGATCTACG ACGTGGTCGG TTCGCTTTGC
GAGAATAACG ACAAATTCGC GGTACAGCGC GAACTCCAGC CGATCGAGGA CGGCGACATC
CTTGTCATCC ATGATTCCGG CGCCCACGGC CACGCCATGG GGTTCCAGTA CAACGGCCGC
CTGCGTCCCA AGGAGCTGAT GCTGCGCGCC GACGGTCGCG TCGAGCTGAT AAGAAGGGCC
GAGACCGTGG AGGATTACTT CGCCACCTAC GACTTCGAGC CCTCCGTCCT CCCCGCCGGC
GCCTAA
 
Protein sequence
MPMSASFKDR LFPRIPQIQQ HFQTPFHIYD ESGIRETGAQ LVKAFSGIPG FREFFAVKAL 
PNREILKLMK EMGFGFDCSS IPEVILAREL GARPEDIMFT SNNTSQEEFD FATQDGGCIM
NLDDISLIEK VPHFPEMICF RYNPGPRRTG NVIIGNPEEA KYGVSHEQVV EAYRQAKERG
ATRFGLHTMV ASNELDYTYI VETARMVLEV AEEVEAALGI KFEFVNIGGG FGIPYRPEQK
TLDLARMSAE VTELFDGFRK RHGHAPAMFM ESGRFMTGPH GALVTTAINS KDTYRRYIGV
DACMSALMRP ALYGAYHHID VLGKDRDPKT EIYDVVGSLC ENNDKFAVQR ELQPIEDGDI
LVIHDSGAHG HAMGFQYNGR LRPKELMLRA DGRVELIRRA ETVEDYFATY DFEPSVLPAG
A