Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2859 |
Symbol | |
ID | 6779711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3289975 |
End bp | 3291240 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642768853 |
Product | Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_002139659 |
Protein GI | 197119232 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000208534 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATGT CAGCTTCTTT CAAGGACCGC CTGTTCCCCC GCATCCCGCA GATCCAGCAG CACTTCCAGA CCCCGTTCCA CATCTACGAT GAATCCGGCA TCAGGGAAAC CGGCGCGCAG CTGGTCAAGG CCTTCTCCGG CATCCCCGGG TTCCGCGAGT TCTTTGCGGT AAAGGCGCTT CCCAACCGCG AAATTCTGAA GCTCATGAAA GAGATGGGCT TCGGTTTCGA CTGCAGCTCC ATTCCCGAGG TGATCCTCGC CCGCGAACTC GGGGCAAGGC CTGAAGACAT CATGTTCACC TCCAACAACA CCAGCCAGGA AGAGTTCGAT TTCGCTACCC AGGACGGCGG GTGCATCATG AACCTCGACG ACATCTCCCT CATCGAAAAG GTGCCGCACT TCCCGGAGAT GATCTGCTTC CGCTACAACC CGGGACCGCG CCGCACCGGC AACGTGATCA TCGGCAACCC CGAAGAGGCG AAGTACGGCG TTTCGCACGA ACAGGTCGTA GAGGCCTACC GCCAGGCGAA GGAGCGCGGC GCCACCCGCT TCGGCCTGCA CACCATGGTA GCCTCCAACG AGCTGGACTA CACCTACATC GTCGAGACCG CGCGCATGGT ACTCGAGGTA GCCGAGGAAG TCGAAGCTGC TTTGGGCATC AAGTTCGAGT TCGTCAACAT CGGCGGCGGC TTCGGCATCC CCTATCGTCC GGAACAAAAG ACGCTCGATC TGGCCAGGAT GTCGGCCGAG GTCACCGAGC TCTTCGACGG CTTCCGCAAG CGCCACGGCC ACGCACCCGC GATGTTCATG GAAAGCGGCC GCTTCATGAC CGGCCCCCAC GGCGCCCTGG TCACTACCGC CATCAACAGC AAGGACACCT ACCGCAGGTA CATCGGCGTC GACGCCTGTA TGTCCGCGCT GATGCGCCCT GCCCTTTACG GCGCCTACCA CCATATCGAC GTCCTCGGCA AGGACCGGGA CCCGAAAACC GAGATCTACG ACGTGGTCGG TTCGCTTTGC GAGAATAACG ACAAATTCGC GGTACAGCGC GAACTCCAGC CGATCGAGGA CGGCGACATC CTTGTCATCC ATGATTCCGG CGCCCACGGC CACGCCATGG GGTTCCAGTA CAACGGCCGC CTGCGTCCCA AGGAGCTGAT GCTGCGCGCC GACGGTCGCG TCGAGCTGAT AAGAAGGGCC GAGACCGTGG AGGATTACTT CGCCACCTAC GACTTCGAGC CCTCCGTCCT CCCCGCCGGC GCCTAA
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Protein sequence | MPMSASFKDR LFPRIPQIQQ HFQTPFHIYD ESGIRETGAQ LVKAFSGIPG FREFFAVKAL PNREILKLMK EMGFGFDCSS IPEVILAREL GARPEDIMFT SNNTSQEEFD FATQDGGCIM NLDDISLIEK VPHFPEMICF RYNPGPRRTG NVIIGNPEEA KYGVSHEQVV EAYRQAKERG ATRFGLHTMV ASNELDYTYI VETARMVLEV AEEVEAALGI KFEFVNIGGG FGIPYRPEQK TLDLARMSAE VTELFDGFRK RHGHAPAMFM ESGRFMTGPH GALVTTAINS KDTYRRYIGV DACMSALMRP ALYGAYHHID VLGKDRDPKT EIYDVVGSLC ENNDKFAVQR ELQPIEDGDI LVIHDSGAHG HAMGFQYNGR LRPKELMLRA DGRVELIRRA ETVEDYFATY DFEPSVLPAG A
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