| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2845 |
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| Symbol | |
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| ID | 6779697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3274459 |
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| End bp | 3276096 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768839 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002139645 |
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| Protein GI | 197119218 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000115656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACG ACCTGACGCC GGAGCGGCGG GAGAAATTAC CGAAGGCTCC ACTCGACATC
TCCCTGCCGG ACCCAAAGGG GGCCTTGTTA CTGCAGGATC TGCAGCGCAG GCTGGCGCGG
GTCGAGGCCG AGAATGCGCA GTTGCGCCGC GTCATCGAAT CCCAGCGTTC CGACGAGGAG
GGGTATCGCT CCCTCTACAA CGACACTCCG GTCATGCTGC ACTCCATCGA CCGCAACGGG
CTGCTCCTGG GAGTCAGCAA CTACTGGGTC GAGGTGCTGG GCTACCAGCG GGAGGAGGTG
ATCGGGCGCA AGTCGACCGA TTTTCTCACC GAGGAATCGC GCCGCTATGC CGAAGAGGTC
GTCCTGCCCG AGTTCTTCCG CACCGGTTTT TGCCGCAACG TCCATTATCA GATGGTGAAA
AAGAGCGGGG AGCTCCTGGA CGTGCTCCTT GTCGCCTCGG GGGAGCGGGG ACCCCAGGGG
GAACTGCTGC GCTCCTTTGC CGTCATGACC GACGTGACCG AATGGAAGGC TGCGGAAAAG
GCTCTGAAGG AGAGCGAAGA GCGCTACCGC ATGATAGTGG AGACCTCCCA GGAGGGGATA
CTAGCCGTCG ATGCCGAAGG GCGCGTAAGC TACGCCAACC GTCAGTTCGC CGAGATGCTG
GGCCTGGAGG TCGGCGACGT CGTCGGGCGT CTTTTCCTTG AGTTCGTCGA CGGCTGCCTG
CACGACGAGA TAGCCGCTAA AATGAAGAGC CGGGAAAAGG GGCTGTCCGA GCATTACGAG
ACGATCTTGC TGCGCAACGG CGGCTCCAGG ATGTGGGCCA GCGTTTCCGC CATCCCGGTA
AAAGGCCCAA GCGGCGACTT CACCGGGGCG TTCGCCATGG TCTCCGACAT CACCAAGCGC
AAACAGGCTG CCGAGGAGAT CGAGGTGCTG CACACGCATC TTTCGGCGCG CGCCTGCGAG
ATGGAGCTTG CCAACGAGGA ACTGGAGGCG TTCAGCTACA CCGTTTCCCA CGACCTCAGA
AGGCCTCTCA CCGCCATCAA CGGCTTCAGC CAGGTGCTGC TCGAGCTTTA CGGTCCCGGC
ATGGACCCGC AGTGCAGGGA ATACGTACGG GAGATCCTCA ACGGCAGCAT CAGGATGAAC
CACCTGATAG ACACGCTGAT CAACTTCTCG CGCCGAAGCG TAGGTGAATC GGTCCGGGAA
GAGGTGGAGA TAACCGGTCT GGTGGAGGAA CTTTACGCCG AACTCAAACG CGCCGAGCCT
CAGCGCAACG TCTCCCTCCT TGTCCAGCCG GGCGTGCGCG GTGTCGCCGA TGCACATCTT
TTGCGCGTGG TCCTGGACAA CCTTTTGGGG AATGCCTGGA AGTACTCCGC CAAAAAGGAG
TTAAGCGAGA TCGCTTTCGG CACCATCGAC CACCAGGGGA AGACCGCCTA CTTCGTCCGG
GACAACGGGG CAGGTTTCGA CATGGCCCTG GGGGATCTGC TGTTCAAGCC GTTCCAGCGC
CTCCACGACG CGCGCGATTT CGAAGGGACC GGCATCGGCC TCGCCAGCGT GCAGCGCATC
ATTCAGCGGC ACGGCGGCCA GATCTGGGCC GAGAGCGAAC CCGGCAAAGG GGCGACCTTC
TACTTCACCC TCGGCTAG
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| Protein sequence | MQDDLTPERR EKLPKAPLDI SLPDPKGALL LQDLQRRLAR VEAENAQLRR VIESQRSDEE
GYRSLYNDTP VMLHSIDRNG LLLGVSNYWV EVLGYQREEV IGRKSTDFLT EESRRYAEEV
VLPEFFRTGF CRNVHYQMVK KSGELLDVLL VASGERGPQG ELLRSFAVMT DVTEWKAAEK
ALKESEERYR MIVETSQEGI LAVDAEGRVS YANRQFAEML GLEVGDVVGR LFLEFVDGCL
HDEIAAKMKS REKGLSEHYE TILLRNGGSR MWASVSAIPV KGPSGDFTGA FAMVSDITKR
KQAAEEIEVL HTHLSARACE MELANEELEA FSYTVSHDLR RPLTAINGFS QVLLELYGPG
MDPQCREYVR EILNGSIRMN HLIDTLINFS RRSVGESVRE EVEITGLVEE LYAELKRAEP
QRNVSLLVQP GVRGVADAHL LRVVLDNLLG NAWKYSAKKE LSEIAFGTID HQGKTAYFVR
DNGAGFDMAL GDLLFKPFQR LHDARDFEGT GIGLASVQRI IQRHGGQIWA ESEPGKGATF
YFTLG
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