| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2807 |
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| Symbol | |
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| ID | 6782806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3236904 |
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| End bp | 3237869 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642768801 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_002139607 |
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| Protein GI | 197119180 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.100428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA CGGTGGCCCT CGGCCCACTT GTGTTGAAGA ATCAACTATT TCTGGCCCCG
ATGGCGGGGA TTACCAATCT GCCGATGCGG ATCATCTCCC GCGAGGGAGG GGCCTCGTTC
GCCTTCACCG AGATGGTAAG CGTGAACGGC CTGACCCGGG AAGGGCAAAA AAGTTTCGAT
CTTTTAAAGA GTAGCCCGGA GGACCGCCCC ATCGGGATGC AGCTTTTCGG CGACGATCCG
GAGATGCTGG CCGAGGCGGC CCGCCTGGTG GAAGAGTACG GCGAGCTGAT CGACATCAAC
ATGGGATGTC CGGTGCGCAA GGTGGTGGGA ACCGGCGCCG GGAGCGCGCT GATGAAGGAC
CCGCAAAAGG TGGGGCGCAT CGTCAGGAGC GTGAGGGCCG CAACGAAGCT TCCGCTCACC
ATCAAGATAC GCACCGGCTG GGTCTGCGGC GACGACACCT TCCTGGAAGT GGGGAGAATC
GCCCAGGAGG AGGGGTGCGA CGCGGTAACG CTGCATCCCA GAAGCCGCGC CCAGATGTTC
GAGGGGAAGG CCGACTGGTC CCGGATCGGC GAGCTGAAGA GCGCGCTCAG CATCCCGGTG
ATCGGCAGCG GCGATCTCTT CAGCGCGGCC GACGCGGTGG GGATGCTGGC CGAAACCGGG
TGCGACTCCG TCATGGTTGC CCGCGGCGCC ATGGGGAACC CCTGGATCTT CCGCGAGGCG
CTTTCCCTTT TGGCCGGTGA GGAGCCGGCT CCCCCGACGG TGCAAGAGCG GCTGGCGGTC
TCCCGCAGGC ACCTGGAGCT TTTCGCCGAG TTCGCGGGGG GGCGGGTGGC GCTCATGGAG
ATGCGCAAGC ACCTCTCCTG GTATTCCAAG GGGCTGCCTG GGGCGGCGCA GTTTCGCGCG
GCGGTGAACC GGATCGAAAG CGCTCCGGAG CTGATCCGGG CGATGGAGGA GTTCTTCGAT
GCCTGA
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| Protein sequence | MQKTVALGPL VLKNQLFLAP MAGITNLPMR IISREGGASF AFTEMVSVNG LTREGQKSFD
LLKSSPEDRP IGMQLFGDDP EMLAEAARLV EEYGELIDIN MGCPVRKVVG TGAGSALMKD
PQKVGRIVRS VRAATKLPLT IKIRTGWVCG DDTFLEVGRI AQEEGCDAVT LHPRSRAQMF
EGKADWSRIG ELKSALSIPV IGSGDLFSAA DAVGMLAETG CDSVMVARGA MGNPWIFREA
LSLLAGEEPA PPTVQERLAV SRRHLELFAE FAGGRVALME MRKHLSWYSK GLPGAAQFRA
AVNRIESAPE LIRAMEEFFD A
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