Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2756 |
Symbol | rpsB |
ID | 6782754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3185359 |
End bp | 3186126 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642768749 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_002139556 |
Protein GI | 197119129 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000868227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGAACA TCACCATGAA GGAACTGCTG GAAGCCGGTG TCCATTTCGG TCACCAAACC AAGAGATGGA ACCCGAAAAT GAAGCCATAC ATCTTCGGCG CTCGTAACGG GATCTACATC ATCGACCTGC AGAAGACCGT AAGGCTCTTC AAGAACGCTT ACAGCTTCGT CACCGACGCA GCACAGGCAG GCGAGACCGT TCTCTTCGTC GGCACCAAGA AGCAGGCACA GGACTCCGTG GCGGAAGAGG CACAGCGCTG CGGGCAGTTC TACGTCAACG ACCGTTGGCT GGGCGGCATG CTCACCAACT TCGCTACCGT GAAGCAGAGC ATCGACCGTC TCAAGCGTCT CGACGCCATG ATCGCTGACG GCACCATCGA GGCTTACACC AAGAAAGAGC AGCTGAAACT TGCCAAAGAG CGCGAGAAGC TGGAGAAGAC CCTGGGCGGC ATCAAGGGTA TGGGCAAGGT CCCGGGCGTT CTGTTCGTTG TCGACCCGAA AAACGAAGAG ATCGCTGTCA GCGAAGCGAA GAAGCTGGGG ATCCCGGTCG TCGCCATCGT CGACACCAAC TGCGATCCGG ACGACATCAA CTACGTCATC CCGGGCAACG ACGACGCTAT CCGCGCCATT CGCCTCTTGA CCAGCAAGAT GGCTGACGCA GTCCTCGAAG GCGGTCAGGC AAGGAACGCA CGTCTCCAGA CCGGCGCCGA GGAAGAGTTC TCCACCGAGG GCGAAGAGGT CGTGGAAGAG ACTCCGGCCG AGGCTTAA
|
Protein sequence | MSNITMKELL EAGVHFGHQT KRWNPKMKPY IFGARNGIYI IDLQKTVRLF KNAYSFVTDA AQAGETVLFV GTKKQAQDSV AEEAQRCGQF YVNDRWLGGM LTNFATVKQS IDRLKRLDAM IADGTIEAYT KKEQLKLAKE REKLEKTLGG IKGMGKVPGV LFVVDPKNEE IAVSEAKKLG IPVVAIVDTN CDPDDINYVI PGNDDAIRAI RLLTSKMADA VLEGGQARNA RLQTGAEEEF STEGEEVVEE TPAEA
|
| |