| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2715 |
|---|
| Symbol | |
|---|
| ID | 6782713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3134002 |
|---|
| End bp | 3134946 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642768708 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_002139515 |
|---|
| Protein GI | 197119088 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTAC TGGTTGTTGA CGACGAGGAA ACCCTGAGAA GCGTGGTGTC GCAGGTTCTT
TCCGCCGACG GCTTCACGGT GGCGGAGGCG GCCAGCGGCG AGGAGGCGCT GGAGGCTTTC
AGGAGCGTGA GCCATCCCCT CGTGATCACT GACATAAGGA TGGGGGGGAT GAGCGGGATC
GAGCTTCTAA CCGAGATCAA GGAGCACAAT CCCGACACCC AGGTGGTGAT CATGACCAGC
CACGCCTCGC TCGACAGCGC GCTCACCGCG CTCAGAGCCG GCGCCTACGA CTACCTGGTG
AAGCCGTTCG AGAGCCTGGA CCTGATCTCC GCGGTGGCGG GGCGGGCGGC GGAGAAGGCT
CGCCTGGTGA CGCAGAACCG GGAGCTCTTG GAGCAATTGA CCCGCGCCAA CGCCGAGCTA
AAGGAGGCGA ACCTGGCACT CAAGGAGCTG GCGGTGCATG ACGGGCTCAC CGCGCTTTAC
AACCATCGCT ACTTCGAGGA GGCGTTTGTT TTGGAGGTGG CCAGGTCCAA GCGCTACGGG
AAGCAGTGCA GCCTCATCTT CATGGATGTC GACAACTTCA AGAGGTACAA CGACACCAAC
GGGCATCCGC AGGGGGACGC GCTTTTGAAG ACCCTGGCGC AGCTCATGAC GACGCACCTG
CGGATCTGCG ACACGGCTGC GCGCTACGGC GGAGAGGAGT TCGTGCTGCT GCTCCCGGAG
ACGCCCAAGG AGGCGGCGCT GGGCGTGGCG GAGGAACTCA GGCGCAGGGT CGCGGAGCAC
CCGTTCCCCG GCGGGGAGAC CCAGCCCTTG GGGAAGGTGA CCATCAGCAT CGGCGTAGCC
GCCTATCCCA GGGACGGGAT GGACGCGCCG GAACTTTTGG ACTTCGCCGA CCAGCTCCTC
TACAAGGCGA AGAACAGCGG GAAGAACATG GTGGTATGGA ACTGA
|
|---|
| Protein sequence | MDLLVVDDEE TLRSVVSQVL SADGFTVAEA ASGEEALEAF RSVSHPLVIT DIRMGGMSGI
ELLTEIKEHN PDTQVVIMTS HASLDSALTA LRAGAYDYLV KPFESLDLIS AVAGRAAEKA
RLVTQNRELL EQLTRANAEL KEANLALKEL AVHDGLTALY NHRYFEEAFV LEVARSKRYG
KQCSLIFMDV DNFKRYNDTN GHPQGDALLK TLAQLMTTHL RICDTAARYG GEEFVLLLPE
TPKEAALGVA EELRRRVAEH PFPGGETQPL GKVTISIGVA AYPRDGMDAP ELLDFADQLL
YKAKNSGKNM VVWN
|
|---|
| |