Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2713 |
Symbol | |
ID | 6782711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3130841 |
End bp | 3131848 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642768706 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_002139513 |
Protein GI | 197119086 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.292431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TCTTCTCTCT GGCACTGCTC TTTCTGTGCC TGGCCGGCAC CGCGCAGCTT GCGGCAGCGG AACAGGAACA ACCCACCATT TACACCATCG TTCCCGGGGA CACCCTCTGG GGACTCTCGC AGCGCTTCCT GAAAGACCCC TACTATTGGC CCAACCTCTG GGCCAACAAT CAGGCCATCG GCAACCCCCA TTTCATCTAT CCCGGGCAGC GGCTGCGCAT CTACAGCGAC CGGATCGAGA TCGAACCGGC GCCGGGTGCG TCCGCCTCGA AGCAGGCGCC CGCGGCTGAG GCGGCGCGCG AAGAGGCCCC GCAGGCAGCG GTCTTCAATA CCACGGGGAG CGAAGGGTTC CTGCTGGAGA ATGGGGCAAA CCCGGCGGGG TTGATCATCT CGCTGCATCA GAACCGGGAG ATGGCGGGAA CCGACGACAT CGTCTACACC GACCTCGGCC TCGACCAAGG CGCCAGCGCC GGCGACCGCT ACTCGATCTT CAAGAAAATA GGGGCGGTAA GCCATCCTCT CACCAACGTC ATCCTCGGGC AGCAGGTCAT GCCGCTTGGC GAGCTGCAAC TCTCCGAGGT GGAGGAAAAG GCTTCCAAGG CGATCATCAC CAAGTCTTAC CAGGAGATAA GCGCCGGTTC CTTCCTGCTT CCTTACCGTG ACCGGAAGGT GACGGTGCCG CTTAAGTCCT CGGACCGCGA CCTTGTCGGC TACATCGTCC AGACCCAGAC CGGGAACACT GCCATAGCGG TGAACGACGT GGTCTTCCTG GACCTCGGGA AGGCACAGGG CGCTCAACCC GGCAACATGT TCTACATCGT GCGCGACGTC ACGCCGGACC AGCGTTACGC CAACACCCGC ATCGAAAAGC TCCCGGTCGA GGTGGTCGGC GCCCTGGTAG TGGTCTCCAC CGGTCTCAAC AGTTCCACAG CCGTCATCGT CAAGAGCGTC GACACCGTGT ACCGTGGCGA CAGGGTGGAG ATGCGAAAAA ACAGGTAG
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Protein sequence | MKRIFSLALL FLCLAGTAQL AAAEQEQPTI YTIVPGDTLW GLSQRFLKDP YYWPNLWANN QAIGNPHFIY PGQRLRIYSD RIEIEPAPGA SASKQAPAAE AAREEAPQAA VFNTTGSEGF LLENGANPAG LIISLHQNRE MAGTDDIVYT DLGLDQGASA GDRYSIFKKI GAVSHPLTNV ILGQQVMPLG ELQLSEVEEK ASKAIITKSY QEISAGSFLL PYRDRKVTVP LKSSDRDLVG YIVQTQTGNT AIAVNDVVFL DLGKAQGAQP GNMFYIVRDV TPDQRYANTR IEKLPVEVVG ALVVVSTGLN SSTAVIVKSV DTVYRGDRVE MRKNR
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