Gene Gbem_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2712 
Symbol 
ID6782710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3129740 
End bp3130819 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content66% 
IMG OID642768705 
ProductDNA protecting protein DprA 
Protein accessionYP_002139512 
Protein GI197119085 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00267536 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACT ACTACTGGTT CGCGCTCAAG TCGGCGCCGC TAGTGGGAAA CGTCACCTTC 
CTGCGGCTTT TGTCCCGCTT CGGGACGCCG GAGCGCGTGC TCGAGGCTTC CCCGCAGGAG
CTCTCGGAGG TCAGGGGAGT GAGCCCGCAG GCCGCGACCT CCATCGCCGG ACACGACTAC
GCTCACCAGG CGTCTAGCGA ATGCGAGAAG GTGCGGGCCT TGGGCGTCGA CGTCATCGAC
ATCCTGTCCG ATCGCTACCC TCGCCTTTTG ATGGAGATCC CGGACCCGCC CCCGTATTTT
TATCTCAAAG GGGCGCTTTC CGGCAGCGAA ACCGCAGTCG CCATGGTCGG TTCCAGGCGG
GCTTCGCAGT ACGGCCTCTG CACCGCGACG AGACTTGCGC GCGACCTGGC GCTGCAGGGA
GTCACCGTCG TCTCAGGGAT GGCGCGCGGC ATAGACACGG CGGCGCACTG GGGAGCGCTC
AAGGCAGGCG GCCGCAGCGT CGCCGTACTT GGTTGCGGCA TCGACCTGGT CTACCCGCCG
GAGAACGGGG CGCTCTACCA GGCTCTTGCC GAGAGCGGGG CGCTCATCAG CGAATTCCCC
ATGGGGACCC CGCCCCAGGC TGAGAACTTC CCCCGCCGCA ACAGGATCAT CAGCGCGCTG
TCGCGCGGCG TGCTGGTAGT GGAGGCGGGG GAGGCGAGCG GTTCGCTGAT CACGGCGCAT
TACGCGCTGG AGCAGGGGCG CGAGGTCTTC GCCGTTCCCG GCAACGTCTC GGTGAGCGGC
AGCAGGGGCG TTAACGGCCT GATCAAGGAA GGGGCCAAGC TCGTGGAGCG GGTGGAGGAT
ATCCTGGAGG AGCTCGGCCT GGAGCCGCAG GCCAACCTTC CCCTCCCGAA GCCCTCGAGC
TTCGAGCTCA ACCCGCAGGA GGCGGAGCTT TACGCCCTCA TTTGCCAGGG GGCGCTGCAG
ATCGACGACA TCATCGTGCA GAGCGCGTTG ACAGCAAGCG AGGTTTCCGC TACTTTACTT
CGCTTGGAAA TGAAGGGAGC CATAGTCCAA CTCCCGGGCA AGCGCTTCGC AGTTGCGTGA
 
Protein sequence
MDHYYWFALK SAPLVGNVTF LRLLSRFGTP ERVLEASPQE LSEVRGVSPQ AATSIAGHDY 
AHQASSECEK VRALGVDVID ILSDRYPRLL MEIPDPPPYF YLKGALSGSE TAVAMVGSRR
ASQYGLCTAT RLARDLALQG VTVVSGMARG IDTAAHWGAL KAGGRSVAVL GCGIDLVYPP
ENGALYQALA ESGALISEFP MGTPPQAENF PRRNRIISAL SRGVLVVEAG EASGSLITAH
YALEQGREVF AVPGNVSVSG SRGVNGLIKE GAKLVERVED ILEELGLEPQ ANLPLPKPSS
FELNPQEAEL YALICQGALQ IDDIIVQSAL TASEVSATLL RLEMKGAIVQ LPGKRFAVA