Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2712 |
Symbol | |
ID | 6782710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3129740 |
End bp | 3130819 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642768705 |
Product | DNA protecting protein DprA |
Protein accession | YP_002139512 |
Protein GI | 197119085 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00267536 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCACT ACTACTGGTT CGCGCTCAAG TCGGCGCCGC TAGTGGGAAA CGTCACCTTC CTGCGGCTTT TGTCCCGCTT CGGGACGCCG GAGCGCGTGC TCGAGGCTTC CCCGCAGGAG CTCTCGGAGG TCAGGGGAGT GAGCCCGCAG GCCGCGACCT CCATCGCCGG ACACGACTAC GCTCACCAGG CGTCTAGCGA ATGCGAGAAG GTGCGGGCCT TGGGCGTCGA CGTCATCGAC ATCCTGTCCG ATCGCTACCC TCGCCTTTTG ATGGAGATCC CGGACCCGCC CCCGTATTTT TATCTCAAAG GGGCGCTTTC CGGCAGCGAA ACCGCAGTCG CCATGGTCGG TTCCAGGCGG GCTTCGCAGT ACGGCCTCTG CACCGCGACG AGACTTGCGC GCGACCTGGC GCTGCAGGGA GTCACCGTCG TCTCAGGGAT GGCGCGCGGC ATAGACACGG CGGCGCACTG GGGAGCGCTC AAGGCAGGCG GCCGCAGCGT CGCCGTACTT GGTTGCGGCA TCGACCTGGT CTACCCGCCG GAGAACGGGG CGCTCTACCA GGCTCTTGCC GAGAGCGGGG CGCTCATCAG CGAATTCCCC ATGGGGACCC CGCCCCAGGC TGAGAACTTC CCCCGCCGCA ACAGGATCAT CAGCGCGCTG TCGCGCGGCG TGCTGGTAGT GGAGGCGGGG GAGGCGAGCG GTTCGCTGAT CACGGCGCAT TACGCGCTGG AGCAGGGGCG CGAGGTCTTC GCCGTTCCCG GCAACGTCTC GGTGAGCGGC AGCAGGGGCG TTAACGGCCT GATCAAGGAA GGGGCCAAGC TCGTGGAGCG GGTGGAGGAT ATCCTGGAGG AGCTCGGCCT GGAGCCGCAG GCCAACCTTC CCCTCCCGAA GCCCTCGAGC TTCGAGCTCA ACCCGCAGGA GGCGGAGCTT TACGCCCTCA TTTGCCAGGG GGCGCTGCAG ATCGACGACA TCATCGTGCA GAGCGCGTTG ACAGCAAGCG AGGTTTCCGC TACTTTACTT CGCTTGGAAA TGAAGGGAGC CATAGTCCAA CTCCCGGGCA AGCGCTTCGC AGTTGCGTGA
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Protein sequence | MDHYYWFALK SAPLVGNVTF LRLLSRFGTP ERVLEASPQE LSEVRGVSPQ AATSIAGHDY AHQASSECEK VRALGVDVID ILSDRYPRLL MEIPDPPPYF YLKGALSGSE TAVAMVGSRR ASQYGLCTAT RLARDLALQG VTVVSGMARG IDTAAHWGAL KAGGRSVAVL GCGIDLVYPP ENGALYQALA ESGALISEFP MGTPPQAENF PRRNRIISAL SRGVLVVEAG EASGSLITAH YALEQGREVF AVPGNVSVSG SRGVNGLIKE GAKLVERVED ILEELGLEPQ ANLPLPKPSS FELNPQEAEL YALICQGALQ IDDIIVQSAL TASEVSATLL RLEMKGAIVQ LPGKRFAVA
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