| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2673 |
|---|
| Symbol | |
|---|
| ID | 6782670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3096485 |
|---|
| End bp | 3097843 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768668 |
|---|
| Product | heavy metal sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002139477 |
|---|
| Protein GI | 197119050 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.319226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA AGCTAAGCAT ACGCCTGCGA CTGACCCTTT GGTACTCCGC AGCCCTTGCG
GCAATCATCC TCTGCTTTAC CCTCGGGGTC TACTGGTCGG TGCGCTCCAG TTTGCTGAGC
AGCATGGATG CCCAGTTGGA TCGTGACTTG GCTACGGTTA CCCGGGTTGC CCGGGACCAG
CCCAATGAAA TAAACGAACT GGCCCAGCAC GGTTCGGTCG ATCTGTTCCA GGTGCGAGAT
GGAAATGTCG TGCTGGCGGA AACGGGGGAT TGGAGCAGGG CAGCAATGGA AAAGGCTCCG
CCCTCCCCGA CTCACCAAAG GCCATGGTCA TGGGTTGCGT CAAGCGGCCT CGGATTTCGT
CTGAAGGCGT TAACGATTAC GGCACCGGGG CACGCATACC TGATTACGGT CGCTGAGGAC
GAGGCGAACC TTCGTGCCAG TCTGAAAAGC CTCAGCACCG TCCTTTCCCT TGGAGTGCCG
TTGGCGCTGG TTCTGGCGCT GATAGGCGGC TACCTCTTAG CCGGTCGCGT CTTGGCGCCC
ATCGAGACCA TGGCGGGGAA GGCCCGAGAG ATCACGGCGG ATCGGCTTTC AGAGCGGCTG
CCGGTCGAGC AAGATGACGA ATTCGGCAAG CTTGCCCAGG TCTTCAACCA AACCTTCGCC
CGTCTGGAGG AGTCGTTCGA CAGGTTGCGC CGGTTCACCT CGGACGCGTC CCATGAACTG
AGGACGCCAC TCACTGCGAT TCGGAGTGTG GGAGAGGTAG GGCTGCGCAA GGGTCTGGAT
GCCGACGCGC TGCGCGAGGT GATATCCAGC ATGCTTGAAG AGGCGGACCG GCTGACCAAG
CTGGTGGACA GTCTGCTGAC CTTGAGCCGG GCGGAATCAG GGACGTTAAA ACTGAGGCCA
GAGCCGACCA ACCTGGTCGC CTTGGTGTCG GAGGTCATCG AATGCCTGGA GGTGTTAGCG
GAAGAGAAAG AGCAGAACAT AGCACTGATG GCCAGCCAAG AAGCGGTTGC AGACATCGAC
CGCGGGACGA TACGCCAGGC GCTGATGAAC GTCCTGGACA ACGCGATTAA GTACTCACCG
CAGGGAAGCC GGATAAGTGT CTGTGTCGAG GTATCTGCCG GCGAGGCTAC CGTCGAGGTC
AGTGACGGTG GCCCCGGTAT CGCCCCCGAA CACGCCAAGA AGGTATTCGA CCGTTTTTAC
CGCATCGATA GCGGGCGCTC CCGGGAGGTG GGCGGAACTG GCTTGGGACT GGCCATCGCG
AGATGGGCGG TGGAGGTAAA CGGAGGGCGC ATAGAATTGG AGAGCGAGCC TGGCAAGGGG
AGCATCTTCA GAATCGTACT CCCGGTCCGG GAATCTTAA
|
|---|
| Protein sequence | MSLKLSIRLR LTLWYSAALA AIILCFTLGV YWSVRSSLLS SMDAQLDRDL ATVTRVARDQ
PNEINELAQH GSVDLFQVRD GNVVLAETGD WSRAAMEKAP PSPTHQRPWS WVASSGLGFR
LKALTITAPG HAYLITVAED EANLRASLKS LSTVLSLGVP LALVLALIGG YLLAGRVLAP
IETMAGKARE ITADRLSERL PVEQDDEFGK LAQVFNQTFA RLEESFDRLR RFTSDASHEL
RTPLTAIRSV GEVGLRKGLD ADALREVISS MLEEADRLTK LVDSLLTLSR AESGTLKLRP
EPTNLVALVS EVIECLEVLA EEKEQNIALM ASQEAVADID RGTIRQALMN VLDNAIKYSP
QGSRISVCVE VSAGEATVEV SDGGPGIAPE HAKKVFDRFY RIDSGRSREV GGTGLGLAIA
RWAVEVNGGR IELESEPGKG SIFRIVLPVR ES
|
|---|
| |