| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2669 |
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| Symbol | |
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| ID | 6782666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3089297 |
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| End bp | 3092440 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642768664 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002139473 |
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| Protein GI | 197119046 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAAC GTCTCATCCT CTTCGCATGT CTGCTTGCCT CCGTCTCCAC GGCGTCGGCC
GCCGATCTCT TCCAGAAAAC GCTCGTGGTA GGCAGCGAGG AAAATTTTCC TCCCTTCTCC
ATCGGCAGTA CCGACGATAC TGCCGGCGGT TTCGCGGTGG AGCTTTGGAA GGAAGTTGCC
CGGGAAGCGG GGCTGAAATA TACCATGAGG GTCAGGCCGT GGGGTGAACT GCTCCAGGAT
TTCAGGGACG GGAAGGTCGA CGTCCTGATT AATATCGCCA CCTCCGACGA GCGGCATCGC
TACACCGACT TCAGCGTCCC GCACGTCACC GTCAACGGCG CCATCTTCGT GCGCACGGGG
GACTCCAGCA TCAGCTCCGA GGCGGACCTG GCGGGGAAGT CCATCATCGT GTTCAAATCG
GACCTGGCCC ATGAATACGC GGTCTCCAAA GGATGGCAAA AACAACTGGT GCTTGTCGAC
GACGCCCGTG AAGGGCTCAG GCTCCTTTCC TCCGGTAAGC ACGACGCCAT GCTGCTCAGC
AAGCTTGCCG GGATGCAGAC GCTGCGGGAG CTCGGCATCG ACAACGTCCG GGCCTTGGGC
ATCAAGGCCG GTTATGCGCA GAAGTTCACC TTCGGCGTGC ACAAAGGCGA CTCGGACCTC
CTCGCCGCGC TGAACGAGGG GCTGGCCCTG GCCAAGGCTG ACGGGGACTA CGACAAGCTG
TACCAAAAAT GGTTCGGCGT GTACGAGACC AAAGAGCCGA CATTGATAGA CATGTTGAAG
TACCTGCTTC CCTTCGCGCT CTTCGTGGCG TGCCTTGCCG CCTATTTCTT CTACAGGCGC
AGCTGTGAAC GCAAAGAGTC CGAGGCTGCG TTACGCGAAA GCAAGCTGCG CCTCGACACC
ATCCTCGACA ACGTCGGCGC CCACATCTTC ATAAAGGACA CCGATTACCG ATACACCTAT
GTGAACCGCA AGGTCTGCGA GTTGTTCGGT AAACCCGAGG AAATGATCGT GGGCAAGACC
GACGCCGCCT TTTTCTCCTC GGAATCGGTG GAGGAGATAG TCCTCAGCGA CCGTCCGGTG
CTCGAGGAGG GGCTCACGGT CAAAAGGGAA GAGACCGACC TTGCGGCAGA GAACGAGCAG
CCGCACAGCT ATTGGACGGT GAAGCTCCCG CTCCGGGATC GAAGCGGCGC CATATATGGT
CTTTGCGGCA TATCGACCGA CATCACCGAA CTGAAGCTGC TCGAGGACGA GGTGAAGAAA
AAAAGCGCAC AGCTTGAGGA GGAACTGGCT GAGCGGGAGA TAGCACAGGA AACGCTGCAG
GAGCAGACAA TGCTGCTCGA GGAGGAGGTC GAGGAACGCA GTAGGGCCGA GGTCGCGCTC
AAAAAGAGCG AGGAGACCGT TCGGCACAAA TTAAAGGCGA TCCTGGAACC GGAAGGGGAT
ATCGGCGCCC TGGAACTCTC GGATATCATC GACAGCGAGA TGCTCCAGGC CATGATGGAG
GATTTCTACA GAATTACCGG GATGCTGGGG GCTGTTCTCG ATGTCTCGGG CAAGGTGCTG
GTTGCAGTAG GGTGGCAGGA TATCTGCACC AAGTTCCACA GGGTCCACCC CGAGGCATGC
AAAAACTGCC TGGAAAGCGA CACCGTCCTT ACCGAAGGGG TGGCGGCGGG AACCTACAAA
CTCTACCGCT GCAAGAACAA CATGTGGGAT ATGGTGACTC CCATCGAGGT GGGGGGTAAG
CATCTCGGCA ACGTCTTCAT CGGGCAGTTC TTCTACCAGG ACGACCCGCC CGACCTGGAG
TTTTTCCGTG AGCAGGGGAG GCGCTACGGG TTCGACGAGG CGCAGTACCT GGCCGCGCTG
GATCGGGTAC CTCGTTTCAC CAGGGAAGCG GCTGACGCGG GGATGAAATT TTACGCCGAA
CTGACCAAGA TGGTTTCCAC GCTCAGTTTC ACCTCCATAA AGTTGTCCAG GATGCTTGCC
GAGCGCATCC ACCTCGAAGA ACAGCTCCGG CAGTCCCAGA AGATGGAGGC GGTGGGACAA
CTGGCCGGCG GCGTCGCCCA CGACTTCAAC AACATCCTGC AGGTGATCAC CGGCTACGGC
AACATGCTCA TGATGAAAGA AAACCTCACC ACGAAACAGC AGGAATGGGT AGATCATATC
CTGTCCTCGG CTGAACGTGC GGCGCAGCTT ACCAAGGGGT TGCTCGCCTT CAGTCGCAAG
CAGGTGATCT GCCTGGAACC CGTGGACCTG AACGAGGTCA TCGAGAACTT CAAGAAATTC
ATCCTCAGGG TCATCGGAGA GGACATACAC TTGAAAACCG TAACCTACGG GGACCGTCTC
ATCGTGCACG CCGACGTGGG GCAACTCGAG CAGGTGCTGA TCAACCTAGC GACCAATGCG
CGGGATTCAA TGAACAAAGG GGGGATACTG ACCATCGAGA CGGGGCTACA GACGGTGGAC
GCACCCTTTG ACCACGAGTT CGGACGAGCG GAATCGGGAC GCTATGCAGT GGTAACCGTG
TCGGACAGCG GCAGCGGCAT GGATGAGGAG ACCCGCAAGA GGATATTCGA GCCGTTCTAT
ACCACGAAGG AGGTCGGCAA GGGGACCGGC CTCGGCATGG CAATCGTCTA CGGCATCATC
AAGCAGCATA GCGGGATCAT CAACGTTTAC AGCGAGCCCG GGCACGGCAC CACCTTCAGG
ATTTACCTGC CGGTGCAGGA GGCCGAACGG GGCGGGGCGG ATCCCCAGGT CGTTCCGGTG
CAGGCGCCGA TGGGGGGAAG CGAAACGATC CTTTTGGCCG AGGATGATGC GGAAGTCCGC
AAGCTCGCGG TGTCTATCCT TAGCCAGTAC GGTTATGAGG TGATCCAGGC GGTGGACGGA
CAGGATGTCG TCGAGAAGTT CGCAGCCAAC AGGGAAAAGA TAGCGATGAT CCTCATGGAC
ATGATCATGC CGAAAAAGAA CGGCAAGGAG GCCTATGAGG AGATCTCGCT GCTGCAGCCG
GGTGTGAAGG TGCTGTATTC GAGCGGCTAT ACCGCGGACT TCATCCAGAA CCGAGGGGTG
TCGGAAGAGG GGATCGAACT GGTCATGAAA CCGGTTCAGC CGATGGAACT GCTGCGCAAG
GTCAGGGAGA TGCTGGACCG CTGA
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| Protein sequence | MLKRLILFAC LLASVSTASA ADLFQKTLVV GSEENFPPFS IGSTDDTAGG FAVELWKEVA
REAGLKYTMR VRPWGELLQD FRDGKVDVLI NIATSDERHR YTDFSVPHVT VNGAIFVRTG
DSSISSEADL AGKSIIVFKS DLAHEYAVSK GWQKQLVLVD DAREGLRLLS SGKHDAMLLS
KLAGMQTLRE LGIDNVRALG IKAGYAQKFT FGVHKGDSDL LAALNEGLAL AKADGDYDKL
YQKWFGVYET KEPTLIDMLK YLLPFALFVA CLAAYFFYRR SCERKESEAA LRESKLRLDT
ILDNVGAHIF IKDTDYRYTY VNRKVCELFG KPEEMIVGKT DAAFFSSESV EEIVLSDRPV
LEEGLTVKRE ETDLAAENEQ PHSYWTVKLP LRDRSGAIYG LCGISTDITE LKLLEDEVKK
KSAQLEEELA EREIAQETLQ EQTMLLEEEV EERSRAEVAL KKSEETVRHK LKAILEPEGD
IGALELSDII DSEMLQAMME DFYRITGMLG AVLDVSGKVL VAVGWQDICT KFHRVHPEAC
KNCLESDTVL TEGVAAGTYK LYRCKNNMWD MVTPIEVGGK HLGNVFIGQF FYQDDPPDLE
FFREQGRRYG FDEAQYLAAL DRVPRFTREA ADAGMKFYAE LTKMVSTLSF TSIKLSRMLA
ERIHLEEQLR QSQKMEAVGQ LAGGVAHDFN NILQVITGYG NMLMMKENLT TKQQEWVDHI
LSSAERAAQL TKGLLAFSRK QVICLEPVDL NEVIENFKKF ILRVIGEDIH LKTVTYGDRL
IVHADVGQLE QVLINLATNA RDSMNKGGIL TIETGLQTVD APFDHEFGRA ESGRYAVVTV
SDSGSGMDEE TRKRIFEPFY TTKEVGKGTG LGMAIVYGII KQHSGIINVY SEPGHGTTFR
IYLPVQEAER GGADPQVVPV QAPMGGSETI LLAEDDAEVR KLAVSILSQY GYEVIQAVDG
QDVVEKFAAN REKIAMILMD MIMPKKNGKE AYEEISLLQP GVKVLYSSGY TADFIQNRGV
SEEGIELVMK PVQPMELLRK VREMLDR
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