| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2596 |
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| Symbol | |
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| ID | 6782593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3007180 |
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| End bp | 3008052 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642768591 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002139400 |
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| Protein GI | 197118973 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATTA CAGGAAAGAC CAAGGTCGCC GGGATCATCG GCTGGCCGGT CTCCCATTCC
CTTTCGCCGC CGATGCATAA TGCCGCCTTC GAGGCTCTCG GGCTCGACTT TACTTACGTC
CCGTTCCCCG TTGCGCCGGA GCGCCTTGCC GCAGGGATAG CCGGCCTCGC CGCCCTGGGT
GTGGTCGGCT TCAGCGTCAC CATCCCGCAC AAGGTGGCGA TCTTGCCCCT TTTGGACCGG
GTCACGCCGG AGGCCGAATT GATCGGCGCG GTGAACACGG TCGCAGTAGA GGAAGGAGCC
CTCACCGGCT ACAACACGGA CGGGATCGGG CTTTTGTCCG CGCTCCGCTC GAAGCTAGGC
TTCCACCCCG AGGGGCGCTC GGTGCTGGTG CTAGGAGCCG GCGGTGCTGC CAGAAGCGCC
GTTGCCTCGC TGGGACTTGC CGGCGCCGGC AGGGTCGAGG TGGCGAACCG CTCCCCGGAC
GCAGGGCGCT GCCTGGCAGA GGCGATGCGG GAGCGCCTCG CCGGGACCGA TTTCGGGTTT
CAGCCGCTGG GCCAAATATC CGATAAGGGA TACATGTCCA GCTTCGACCT CGTGGTCAAC
ACCACCTCGG TGGGGATGGC GGGGGATGCC TTCGCCGGGC TCGATCTGGC CGCGCTGAAG
CCCGGCGCCT GCGTCTACGA CATGGTGTAT GCGCCTCCGG TAACCCCGTT GCTGGCTCAG
GCGGAGGCTG CCGGTGTGCC GTGGGCGAAC GGGCTGGGGA TGCTGGCCGC GCAGGGGGAG
GCGGCATTCC GGATCTGGAC CGGGGCCATC CCTCCGGAGG GGTGCATGGA AAAGGCGCTA
GCCGCCCGGC TCACAACCCC AGGTAACCCT TGA
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| Protein sequence | MTITGKTKVA GIIGWPVSHS LSPPMHNAAF EALGLDFTYV PFPVAPERLA AGIAGLAALG
VVGFSVTIPH KVAILPLLDR VTPEAELIGA VNTVAVEEGA LTGYNTDGIG LLSALRSKLG
FHPEGRSVLV LGAGGAARSA VASLGLAGAG RVEVANRSPD AGRCLAEAMR ERLAGTDFGF
QPLGQISDKG YMSSFDLVVN TTSVGMAGDA FAGLDLAALK PGACVYDMVY APPVTPLLAQ
AEAAGVPWAN GLGMLAAQGE AAFRIWTGAI PPEGCMEKAL AARLTTPGNP
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