Gene Gbem_2526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2526 
Symbol 
ID6782523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2927604 
End bp2929118 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content61% 
IMG OID642768521 
ProductRND efflux system, outer membrane lipoprotein, NodT family 
Protein accessionYP_002139330 
Protein GI197118903 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTTG GAAATGAAAA CGACTTTGAC ATGACTGGAG AGTTCGCAAA CCGGCCGGAT 
GCACGAAAAT ACATCCGCCA CTTGCCCGTG TTCCTGAGCC TTGCCTTCCT GGGCGCATGT
GCCGTCGGCC CTGATTTCAA GAGGCCGGTG AGCACGCCTC CCGCGCACCT CATGGAGACC
ACCGGCGAAA CCGGCAGGCA GAGCCAGGTA GTGACGGGGA AGATGGAGAC GGCATGGTGG
ACGCTGTTCA ACGACGAGAT TCTGAGCGAA CTTCAGGAGC GCGCTCAGAG AGGGAACTTC
GATCTGCAGT TGGCGGCTGC GCGTCTGGCG CAAAGCCGTG CGCAGACCGG CATAGCTAAT
TCTGCAGGGC TTCCGCATCT CAGCATAGGC GGCTCCTATG CGCGGGCCGC AGACAGCGCT
AACGGCCAAA TGGCGCTACT TGGCGCTCCC GACACCCCCT ACGACATTAT GCAGGCGGGA
TTCAACGCGA GTTGGGAAAT CGACATGTGG GGGCACGCCC GGAGGACCAG CGAGTCTGCC
GCGGCATCGC TGCAGGCAAG CGCGTTCCAA CGAGAAGGGG TGCGCGTGTC GCTTGCCGCC
GAGGTAGCCC GCACCTACAT CCAGTTGCGC CACGTCCAGA CGCAATTGGA CATTACCCGC
CAAAACCTGG CCATTGCCGA GAATGCCCTG AAGCTGGCGG ACAGTCGTGT AAAAAACGGC
ATAGCCACCC GCTTCGAGTC GGCAGCATCA TCAGCACAGT TGGCGTCGAC CAAGGCGCTG
ATCCCTCGCC TGGAGGAGCA ACGTGACGCG CTGATGAATG CCCTCGCCTT GCTGCTTGGC
GAACCTCCTC GTACCCTGGA TGCCATGTTG ACACCGACGC ACCAAATCCC GCCCGTGCCA
AGCGAGGTGC CAATCGGTTT ATCCTCTGAA CTTGCTCGCC GTCGCCCCGA CATCCTCCAA
GCCGAAGCAC GTCTTCATGC TGCAACAGCT GCCATCGGTG CAGCCAAAGC TGACTTTTAT
CCGCGCATCA GCCTGAACGG CAGCCTTGGT TTCCAGTCCC TCAACCTGGA TACCTTCGGC
AACTGGGCAT CGCGCACCTT CGCGGTGGGA CCGACTCTCT ACCTGCCCAT CTTCGAAGGG
GGGAGGCTGA GAGGCACGCT TGCCCTTAGC GAGGCCCGTC AACAGGAGGC GGTGATCGCC
TATCAGAAAA CGGTGCTGCA TGCCTGGCAC GAGGTCGACG ATGCGTTGAG CTCTTATTCC
GAGGTACAGC GGCGCGGCGA ACAACTGGCC CTGGCCTTCG GCCAATACCG CCAGGCTTAC
CAAGTTGCGC TGCGTCGCTA TGAGCAGGGT GCCGCCGAGT ACCTGATGGT CCTGACCGCA
CAACGCTCGT TATTGGCCAG CCAGATGGAA CTTGCGGACA ACACCAGCCG AGTTTCGTTA
GCCATGGTCA ACCTGTACAA AGCGCTGGGG GGGGGATGGG CAGCCCAGAC GGATGAAAAG
GGAGGGCAGC GATGA
 
Protein sequence
MRFGNENDFD MTGEFANRPD ARKYIRHLPV FLSLAFLGAC AVGPDFKRPV STPPAHLMET 
TGETGRQSQV VTGKMETAWW TLFNDEILSE LQERAQRGNF DLQLAAARLA QSRAQTGIAN
SAGLPHLSIG GSYARAADSA NGQMALLGAP DTPYDIMQAG FNASWEIDMW GHARRTSESA
AASLQASAFQ REGVRVSLAA EVARTYIQLR HVQTQLDITR QNLAIAENAL KLADSRVKNG
IATRFESAAS SAQLASTKAL IPRLEEQRDA LMNALALLLG EPPRTLDAML TPTHQIPPVP
SEVPIGLSSE LARRRPDILQ AEARLHAATA AIGAAKADFY PRISLNGSLG FQSLNLDTFG
NWASRTFAVG PTLYLPIFEG GRLRGTLALS EARQQEAVIA YQKTVLHAWH EVDDALSSYS
EVQRRGEQLA LAFGQYRQAY QVALRRYEQG AAEYLMVLTA QRSLLASQME LADNTSRVSL
AMVNLYKALG GGWAAQTDEK GGQR