Gene Gbem_2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2516 
Symbol 
ID6782513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2916223 
End bp2918565 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content63% 
IMG OID642768511 
ProductPTSINtr with GAF domain, PtsP 
Protein accessionYP_002139320 
Protein GI197118893 
COG category[T] Signal transduction mechanisms 
COG ID[COG3605] Signal transduction protein containing GAF and PtsI domains 
TIGRFAM ID[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000436421 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGAGG AGACAGGGGA ACAACTGGGA CTGAGGACAC TGGAGGACAT CAGCATGCTG 
ATCCTTCACT CCCACGATCT GCAGGAGACC CTGGATAATA TAGTCAACCT CGTTGCTAAG
AGAATGTCCT CCGACGTCTG TTCCATCTAC CTTCTGGAGG AGGACGGCGA GACCCTGAGG
CTGCACGCGA CCCGCGGTCT CTCCAGGCTC TCCGTCGGCA TCACCATGAA GACCTCGGAA
GGCCTCACCG GCCTCGCCAT CGAGCAGCGC GGCGTAGTGG CGACGGACAA CGCGCCGCGG
CACCCGCGCT ACAAGTACTT CAGGCAGACC AAGGAGGAAA AGGTCCTTTC CTTCTTAGGC
GTCCCCTTCT TCGAACGCAA CAACCCCATC GGCGTCCTGG TCATACAAAA CCGCGACGCG
CGCACCTTCA CCTCCCAGGA AATCAGCGCC GTCTCCACCA TCGCCTGGCA GATCTCCAGC
ATCGTTTCCA ACGCAAAACT CCTCGACTCC GTCAGGAAGA AGGAAGAGGA GCGGGCTTTT
TACGCAGCCG AGGTGGACCG GCTCCGCAAA ACCGGGGTAC TCAAGGATAC CGGCCGCGCG
AGCCGCAAGA GCCAGGGATC GGGAGTATTG ACCGGGATCG GGATTTCCCC CGGTTTCGCA
GTGGGGAGAA TTTCGGTACT GCACCGTGGT GCGAGCGAAG AGGCGGTCCT GGAACAGGCG
CGGCCGCGCG CCGAGGAACA GACCCGCTTC CTGCACGCGC TGGAGAAGGC GCGCATCCAG
ACCATCTATA TGGAAAAGCG GGTGGGCCAG ATCCTATCCG AGGCCGACGC CGCCATCTTC
CACAGCCACC TGATGATACT GGAGGACCGC GGCTTCATCG GGAAGATCGG CGCGCTGATC
GACGAGGGGC TGGGTGCCCA AACCGCGGTA AGCCAGGTGG TGGACAGCTA CGTGGCGGCC
TTCGCCCGGA TGCAGGACCC CTACCTGCGC GAGCGCAGCG CCGACATGGA GGACATCGGG
CGCAGGATCT GCGACGCGCT GAACGGCAGC AACCACAAGC ACAGGGAACG CCTGCGCGAC
CCGCGGATCA TCATCGCCCG GGAACTGCTC CCCTCCGACC TCGCCATCAT GGACCACGGC
AAGGTGACCG GCATCGCCAC CGAGAAGGGG AACCAGAACG CCCACGCGGC GATCATGGCC
CGGGCGCTCG GCATTCCTGC CGTCTTCGGG GTAGAGGGGC TGTTGAAAAA GGTCGGGGCT
CGCTGCGAGG TGGTCGTTGA CGGCAACTCC GGCTGCGTCT ACGTAAACCC GGACCAACGC
ATCAAGAAGG AATATCAGCG GCTGCAGGGG GAATTCGACC AGAAGCAGCG CGAGCTGGAA
GGTATCCGGG ACCTACCCGC CGTGACCACC GACGGCTGCA CCGTCTCTCT TCTGGCCAAC
ATCGGACTTC TGAGCGATTT GAGGGTAGCG CAGGCGCACG GAGCCGAGGG GGTCGGGCTG
TACCGGACCG AGTTCCCGTT CATGAGCCGC AACTCGTTCC CCGGGCGCGT GGAGCAGGCC
GCCATCTACC GCAAGGTGCT GGAAGGGTTC CCAGGGCTCC CGGTCACCAT CAGGACCCTC
GACATAGGCG GAGACAAGGA GCTTTCCTAC TTCCCCCACC CAAAGGAAGA CAACCCCTTC
CTGGGGTGGC GCTCCATGCG CATCTCACTC GACCGCGAGG ACATCTTCCG CGAGCAGTTG
GCTGCGGTGC TTTTGGCGTC CGCCAGCGGC AGGTGCAACA TCATGTTCCC CATGATCTCC
GGCGTGGACG AAGTGCGCCG CATCAAGGGG ATACTGGAAC AAGTGAAAGA AGAGCTGAGA
AAAGATGGGA AGGAATTCGC CCAGGATATT GGGCTCGGGG TCATGGTAGA GCTGCCGGCG
GCGGTGCTGG TAGCGGAGAT GCTGGCCCGC GAGGTCGATT ACCTGAGCAT CGGGACCAAC
GACCTGATCC AGTACACCCT TGCCTGCGAC AGGAACAATC CGCTGGTGAA GAAGTGGTAC
GACCCGTACC ATCCTGCGGT CCTGCACTCG ATCAAGAAGG TGGCGCAAGC GGCTGCGGGC
GCGGGGAAGC CGGCGTCTTT GTGCGGCGAG ATGGCGGGAG AACCGATCAA CGCGGTCCTT
TTGCTGGGGC TTGGGATACG CTGCTTCAGC CTTTCCGCGC CGAACATACC GCGCGTGAAA
GAGGCCATAC GCGCCATTTC CCTGGGGCAG GCGGAACAGA TAGCCGGACA GGTGCTGCGG
ATGGAAAGTG CCCTCTCCAT CAAGAGCTAC CTGGAATCGG TACAGCGCGA GCTGGGGCTG
TAA
 
Protein sequence
MPEETGEQLG LRTLEDISML ILHSHDLQET LDNIVNLVAK RMSSDVCSIY LLEEDGETLR 
LHATRGLSRL SVGITMKTSE GLTGLAIEQR GVVATDNAPR HPRYKYFRQT KEEKVLSFLG
VPFFERNNPI GVLVIQNRDA RTFTSQEISA VSTIAWQISS IVSNAKLLDS VRKKEEERAF
YAAEVDRLRK TGVLKDTGRA SRKSQGSGVL TGIGISPGFA VGRISVLHRG ASEEAVLEQA
RPRAEEQTRF LHALEKARIQ TIYMEKRVGQ ILSEADAAIF HSHLMILEDR GFIGKIGALI
DEGLGAQTAV SQVVDSYVAA FARMQDPYLR ERSADMEDIG RRICDALNGS NHKHRERLRD
PRIIIARELL PSDLAIMDHG KVTGIATEKG NQNAHAAIMA RALGIPAVFG VEGLLKKVGA
RCEVVVDGNS GCVYVNPDQR IKKEYQRLQG EFDQKQRELE GIRDLPAVTT DGCTVSLLAN
IGLLSDLRVA QAHGAEGVGL YRTEFPFMSR NSFPGRVEQA AIYRKVLEGF PGLPVTIRTL
DIGGDKELSY FPHPKEDNPF LGWRSMRISL DREDIFREQL AAVLLASASG RCNIMFPMIS
GVDEVRRIKG ILEQVKEELR KDGKEFAQDI GLGVMVELPA AVLVAEMLAR EVDYLSIGTN
DLIQYTLACD RNNPLVKKWY DPYHPAVLHS IKKVAQAAAG AGKPASLCGE MAGEPINAVL
LLGLGIRCFS LSAPNIPRVK EAIRAISLGQ AEQIAGQVLR MESALSIKSY LESVQRELGL