Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2412 |
Symbol | |
ID | 6782410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2794929 |
End bp | 2796383 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642768409 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002139218 |
Protein GI | 197118791 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACC CGGTTATGGA AAATCTTTCT ACGCTCGATC TCGAGGAGAT GGCGCGCCAG ATGCGGGCGT TCCAGGATCT GACCCGCGAG CTGGATGCGA TCATCGATTC GTCCTCGGAC GGCCTCTGGA TCTGCGACGC CGAGGCCCGA GTCATCCGCA TCAACCCTGC CTCGGAGCGG ATCAACAACA TAAAGGCGTC GGAAGTTGTC GGCAAGAACA TGCGGAAACT TCTGGATGAA GGTTTCATAG ACCGCTCGGC GGCGCTCGAG GCGATCACCA CCAAGAAGGT GGTCAGCCAA CTGCAGAACA GGGAAGGGCG CAAGCTCATC TCGACGGGGA CTCCGGTTCT GGACGCAAAC GGCGAGGTGA TCCGGGTCGT GGTAAGCGAG CGGGACATCA CGGAGATCGA TAACTTGCAG CGCGAACTGG AAGAGCAGGA GGCGCTGCGG GATCAGTTCC GTAACCACAT GCTGGAACTT CAGCAGGCAG ACGTGGCCTC CAAGAGCGTC GTCGCCCGCA GTCCGCTGAT GGTGAACGCC CTGAAGCAGG CGCTTAAAGT GAGCGCGGTC AACTCGACGG TGCTGATTCT CGGGGAGTCG GGCGTTGGCA AGGGGCTCAT TGCCGAGTTG ATACACAAGA ATTCCACCAG GGCCGACAAG CCTCTCATCG AGATAAACTG CGGTGCCATA CCGGAGTCGC TGATAGAGTC GGAGCTCTTC GGTTACGAGA AGGGAGCCTT TACCGGTGCG CAGACGACTG GCAAACCCGG CTATTTGGAA CTTGCCGACG GCGGCATCCT GTTCCTGGAC GAGATCGCGG AGTTGCCGCA GTCGGCGCAG GTGAAGCTGC TGCGCTTCCT CGAAAACGGG AAGGTGATCC GCTTGGGAGG GACCAAGGCC AGGCATCTGG ACGTCCGCAT CCTGGCGGCG ACGCACCGCA ATCTGGACGA GATGGTGCGG CAGGGAAGCT TCAGGCTGGA CCTTTATTAC CGGCTCAACG TGATCCCCAT CAGCGTTCCG GCTTTGCGCG AGCGGCGGGA CTGCATTTTG CCGCTGGTAA GACACTACCT GGAACTTTTC GGCGCTCGCG ACTCCATTCG CAAGCGTATC ACCCGTGCCG CCTCCGATGC GCTTCTTGCC TACGACTACC CGGGAAACGT GCGTCAGTTG ATGAACGTCT GCGAGCGGCT CGTGGTCATG GCGGAAACGG ACCTGATCGA CGTGAAGGAT CTCCCTGCTG AGATCTCTGC CGGCGCCGGT AAGCCGACCG CGGTGGCCGG GGTCTGGCAG GAGGATGTGC CGCTGCAGGA GACGCTGGAT CAGGTCGAGA AGGCCGTCCT GGAAAAGGCG CTGGCCAAAC ACCGCAACCA AATGCGCATG GCTGAGGTTC TTGGGGTGAA CCAATCGACC ATTGCAAGGA AACTTAGGAA ATACAAGCTG ATTAACCCCA ATTGA
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Protein sequence | MTDPVMENLS TLDLEEMARQ MRAFQDLTRE LDAIIDSSSD GLWICDAEAR VIRINPASER INNIKASEVV GKNMRKLLDE GFIDRSAALE AITTKKVVSQ LQNREGRKLI STGTPVLDAN GEVIRVVVSE RDITEIDNLQ RELEEQEALR DQFRNHMLEL QQADVASKSV VARSPLMVNA LKQALKVSAV NSTVLILGES GVGKGLIAEL IHKNSTRADK PLIEINCGAI PESLIESELF GYEKGAFTGA QTTGKPGYLE LADGGILFLD EIAELPQSAQ VKLLRFLENG KVIRLGGTKA RHLDVRILAA THRNLDEMVR QGSFRLDLYY RLNVIPISVP ALRERRDCIL PLVRHYLELF GARDSIRKRI TRAASDALLA YDYPGNVRQL MNVCERLVVM AETDLIDVKD LPAEISAGAG KPTAVAGVWQ EDVPLQETLD QVEKAVLEKA LAKHRNQMRM AEVLGVNQST IARKLRKYKL INPN
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