Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2212 |
Symbol | |
ID | 6782208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2573714 |
End bp | 2574781 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642768208 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_002139020 |
Protein GI | 197118593 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000181482 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA AAACCTATTT CAGCATTCTC GCCGCTTTTT TGACCATAGC TGCCATAGCT CTCATCGTCC TACTCGCCGT CCCCATACTT AAGCCCCTCG CCTGGGCGCT CATCATCGGC ATCGCCACCA TGCCCCACTA CAACAGGATC CTCAAGCGCT TTCCCGAGCG TGCCGGCCGT GCGTCGGGAC TTATGGTGCT GGCGGTGAGC TTGTGCCTGG TGCTTCCCGC GACCTGGCTG GTGGTGACGG CCGCCGTCAG CGCCCCCGAC TGGTACCGCC AGGTCGAGCA ACTAGTTCAA GATTTCAGCA AGACAGGAAG CGGAGCGCTG AGCCAGTTGC CGTTCTACGA CCGGATCATG GGCCTGGTGC AGAAGTTCGG CATCGATCTG GCCGGGATCG GTCAAAAAGC CGCCTCCAGC GCTTCGACCA TCGTCCTCAA CACCGCCACC GACATGGTCC GCAACCTTTT CGATCTCATC TTCACCCTGC TGGTCGCCCT GTTCCTGCTT TTCTTCGTTT ACCGCGACGG AGAACGGGCA GTCTCGGTCT GCATCGCAAA GCTCGCCCCG GACCAGCGCA GGGCGCAGCA CTTAGCGGCC CAGATCCGTT CCATCACCAC GGCCGTCACC GTCGGCACCC TGCTTACCTG CGCCACCCAG GGGGTCCTCG CTGGTCTCGG CTACTGGGTC GCCGGCGTTC CCGCGCCTAT CTTTTGCGGC GCTCTCACCG CCATCGCCGC TTTGGTGCCG GTGGTCGGCA CAGGCGTCGT CTGGGTCCCG CTGGTCGCGC TTATTGCAGT GCAAGGTTCC TACCTTAACG CCGTCCTTCT TGCGCTATGG TGCATCCTCT TCGTGGGTGT AGCCGATAAC GCCATCCGGC CGCTCGCCGT CGGCGCCTCC AGCGACGTCT CGGTCCTCGC CGTCGTCGCC GGGGCCATCT GCGGCGTGGT GATCATGGGG GTCCTCGGGC TGATCGTGGG GCCGTTGATC TTCGCGGTCC TGTTCAGCAT CTGGGACGAT GTCGTTGCCG AACCGGGATC GATCGAATAC GGCGGCGAAG CCCCCTGA
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Protein sequence | MDKKTYFSIL AAFLTIAAIA LIVLLAVPIL KPLAWALIIG IATMPHYNRI LKRFPERAGR ASGLMVLAVS LCLVLPATWL VVTAAVSAPD WYRQVEQLVQ DFSKTGSGAL SQLPFYDRIM GLVQKFGIDL AGIGQKAASS ASTIVLNTAT DMVRNLFDLI FTLLVALFLL FFVYRDGERA VSVCIAKLAP DQRRAQHLAA QIRSITTAVT VGTLLTCATQ GVLAGLGYWV AGVPAPIFCG ALTAIAALVP VVGTGVVWVP LVALIAVQGS YLNAVLLALW CILFVGVADN AIRPLAVGAS SDVSVLAVVA GAICGVVIMG VLGLIVGPLI FAVLFSIWDD VVAEPGSIEY GGEAP
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