Gene Gbem_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2212 
Symbol 
ID6782208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2573714 
End bp2574781 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content63% 
IMG OID642768208 
Productprotein of unknown function UPF0118 
Protein accessionYP_002139020 
Protein GI197118593 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000181482 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA AAACCTATTT CAGCATTCTC GCCGCTTTTT TGACCATAGC TGCCATAGCT 
CTCATCGTCC TACTCGCCGT CCCCATACTT AAGCCCCTCG CCTGGGCGCT CATCATCGGC
ATCGCCACCA TGCCCCACTA CAACAGGATC CTCAAGCGCT TTCCCGAGCG TGCCGGCCGT
GCGTCGGGAC TTATGGTGCT GGCGGTGAGC TTGTGCCTGG TGCTTCCCGC GACCTGGCTG
GTGGTGACGG CCGCCGTCAG CGCCCCCGAC TGGTACCGCC AGGTCGAGCA ACTAGTTCAA
GATTTCAGCA AGACAGGAAG CGGAGCGCTG AGCCAGTTGC CGTTCTACGA CCGGATCATG
GGCCTGGTGC AGAAGTTCGG CATCGATCTG GCCGGGATCG GTCAAAAAGC CGCCTCCAGC
GCTTCGACCA TCGTCCTCAA CACCGCCACC GACATGGTCC GCAACCTTTT CGATCTCATC
TTCACCCTGC TGGTCGCCCT GTTCCTGCTT TTCTTCGTTT ACCGCGACGG AGAACGGGCA
GTCTCGGTCT GCATCGCAAA GCTCGCCCCG GACCAGCGCA GGGCGCAGCA CTTAGCGGCC
CAGATCCGTT CCATCACCAC GGCCGTCACC GTCGGCACCC TGCTTACCTG CGCCACCCAG
GGGGTCCTCG CTGGTCTCGG CTACTGGGTC GCCGGCGTTC CCGCGCCTAT CTTTTGCGGC
GCTCTCACCG CCATCGCCGC TTTGGTGCCG GTGGTCGGCA CAGGCGTCGT CTGGGTCCCG
CTGGTCGCGC TTATTGCAGT GCAAGGTTCC TACCTTAACG CCGTCCTTCT TGCGCTATGG
TGCATCCTCT TCGTGGGTGT AGCCGATAAC GCCATCCGGC CGCTCGCCGT CGGCGCCTCC
AGCGACGTCT CGGTCCTCGC CGTCGTCGCC GGGGCCATCT GCGGCGTGGT GATCATGGGG
GTCCTCGGGC TGATCGTGGG GCCGTTGATC TTCGCGGTCC TGTTCAGCAT CTGGGACGAT
GTCGTTGCCG AACCGGGATC GATCGAATAC GGCGGCGAAG CCCCCTGA
 
Protein sequence
MDKKTYFSIL AAFLTIAAIA LIVLLAVPIL KPLAWALIIG IATMPHYNRI LKRFPERAGR 
ASGLMVLAVS LCLVLPATWL VVTAAVSAPD WYRQVEQLVQ DFSKTGSGAL SQLPFYDRIM
GLVQKFGIDL AGIGQKAASS ASTIVLNTAT DMVRNLFDLI FTLLVALFLL FFVYRDGERA
VSVCIAKLAP DQRRAQHLAA QIRSITTAVT VGTLLTCATQ GVLAGLGYWV AGVPAPIFCG
ALTAIAALVP VVGTGVVWVP LVALIAVQGS YLNAVLLALW CILFVGVADN AIRPLAVGAS
SDVSVLAVVA GAICGVVIMG VLGLIVGPLI FAVLFSIWDD VVAEPGSIEY GGEAP