| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2193 |
|---|
| Symbol | |
|---|
| ID | 6782187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2553060 |
|---|
| End bp | 2553641 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642768187 |
|---|
| Product | indolepyruvate oxidoreductase subunit beta |
|---|
| Protein accession | YP_002139001 |
|---|
| Protein GI | 197118574 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0404951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA AGATAACCAA CATCCTCCTG GTAGGCGTCG GCGGCCAGGG CATCCTGCTT
GCCGCCGAGA TCCTTTCCGA GACCTTCATG CTGGCTGGAT TCGACGTCAA GAAGAGCGAG
ATCCACGGCA TGTCCCAGAG GGGGGGCTCC GTCGTCTCCC ACGTGCGCTA CGGCAAAGAG
GTCTTCTCCC CGATGGTCCC CGAAGGGGAG GGGGACATCC TCTTCGGATT CGAGCTGATG
GAGAGCTACC GCTACCTGTC GCTCTTAAAG CCCGGCGGCA CCGTCATCGT CAACGACCTC
TGCATAGCTC CCCCCGCGGT GCTCTTGGGG CAGGAGCCGT ACCCGGATGG CCTCGCGCTG
AAGATCCAGG AGCTTTGCCC CGACTGCCTG CTGGTCGATG GGCAGAACCT CGCCATCGAG
GCCGGCAACG CCCGCGCCGC GAACACCGTG CTTCTGGGTG CCGTATCCAA GCGACTCGAC
GTCGAGGAGA AGTACTGGCT CGAAGCGATC GAGAAGATGG TGCCCAAGAA GGCGCTGGCA
GTGAACCTCA AGGCTTTCGC GCTCGGCCGT TCGCTGGGGT AA
|
|---|
| Protein sequence | MSDKITNILL VGVGGQGILL AAEILSETFM LAGFDVKKSE IHGMSQRGGS VVSHVRYGKE
VFSPMVPEGE GDILFGFELM ESYRYLSLLK PGGTVIVNDL CIAPPAVLLG QEPYPDGLAL
KIQELCPDCL LVDGQNLAIE AGNARAANTV LLGAVSKRLD VEEKYWLEAI EKMVPKKALA
VNLKAFALGR SLG
|
|---|
| |