| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2164 |
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| Symbol | |
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| ID | 6782158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2518804 |
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| End bp | 2521941 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768158 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002138972 |
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| Protein GI | 197118545 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGA AAATCATCGA ATATTCCGCC CGAAACCGCG TCATCATCCT GATGCTGTTC
GCCCTGATCA TCGCCTGGGG CGTCTGGTCC GTCTACAAGA CGCCGGTCGA CGCGATTCCC
GACCTTTCGG ACAACCAGGT CATCGTCTTC ACCGACTACC CCGGCCGGTC GCCGCAGGTG
GTCGAGGACC AGGTAACCTA CCCGCTGGCT GTTAACCTGC AAGGGCTGCC GCAAGTCCGC
GCCGTGCGCG CCTCCTCGGC CTTCGGCTTC TCCATGATCT ACGTGATCTT CGAGGACAAG
GCGGACATCT ACTGGGCCAG AACCCGCGTC CTCGAACGCC TCAATTACGC GGCGTCGCTG
CTTCCTTCGG GGGTGGTGCC GACCCTTGGC CCCGACGGCA CCGGGGTGGG TCACGTATTC
TGGTACACGC TGGAAGGGAA GGGGTACGAC CTGGAGCAGT TGCGCACCTT GCAGGACTGG
TTCGTCCGCT ACCAGCTGAA CACGGTCCCG GGCGTTGCCG AAGTCGCTTC CATCGGCGGC
TTCGTGCGCG AGTACCAGGT AGACCTCGAC CCGAACCGCC TGTTCGCCTA CAACATCAAG
GTCTCCCAGG TGGCCGACGC CATCAAGAAG TCCAACAACG ACGTCGGCGG CAGGCTCCTG
GAACAGGCCG ACGCCGAGTT CCTCATCCGC GGCCGCGGCT ACGTGAAATC GACCGCGGAC
CTGGAAAACA TCGTGGTCGG CGCCGACATG CGCGGCACCC CGATCTACGT GAAGAACTTG
GGCACCGTGC AACTCGGCGG CGCCATCCGC CGCGGCATGC TGGACATGAA CGGCGAAGGC
GAGGCCGTGG GCGGCATCGT GGTCATGCGC TACGGCGAGA ACGCCAAGGA CGTCATCGAC
CGGGTCAAGG AGAAGATAGT CTCCTTGGAG AAAGGGCTTC CCCCCGGCGT CAAGATCATG
GTCTCATACG ACCGCAGCGA CCTCATCGAG CGGGCCATCG ACACGCTGAA GCATTCGCTG
GTCGAGGAAT CCATCGTAGT GTCGCTGGTG ATCCTCGTCT TCCTGCTCCA TTTCCAGAGC
GCATTGGTCA TCGTGCTGAC GCTTCCTATC GCGGTGCTCA TCTCCTTCAT CACCATGAAG
CTCATGGGGG TCAGCTCGAA CATCATGTCC CTTGGCGGCA TCGCCATCGC CATCGGCGTC
TTGGTCGACG CCGGCGTCAT CATGGTGGAG AACTGCTACC GCCACCTCTC CGAGATGCCC
CCCGAGGAGC GCAAGGAAAA GCGTCTTGAT GTGATCATCG CCTCGGCCAA GCAGGTAGGG
CGTGCCATCT TCTTCTCTTT GGCCATCATC ATCCTCTCCT TCGTGCCGGT GTTCCTGCTC
GAAGGGCAGG AAGGAAAGAT GTTCCACCCG CTGGCCTTCA CCAAGACCTT CTCCATGATG
GGGTCGGCCT TCATCGCCAT AACGCTCGTG CCGGTGCTCA TGTACTTCCT GATGCGCGGG
AAGATGCCGC CGGAAAGCTC CAACCCGGTC TCCACCTTCT TCATCAAGAT GTACTCCCCG
ATCATCAGGT GGGTGCTCAA GTGGAAGAAG ACCACCATCG CGCTGAACGT CGTGGCGCTC
GCCATCGCCA TCCCCATGTT CATGAGCATC GGCAGCGAGT TCATGCCCCC CCTCGACGAG
GGGTCGCTCC TCTACATGCC GGTGACGCTC CCCAACGTCT CCATCAACGA GGCGAAGCGC
CTGATTCAGG TGCAGGACAC AGTGATCAAG AGCGTACCCG AGGTGGAGCA CGTGCTGGGC
AAGGTGGGGC GCGCCGAGAC CTCGACCGAC CCCGCGCCGG TCTCCATGTT CGAGAGCATC
ATCATCCTGA AACCCAAGGA CAAGTGGCGC GCGGGGGTGA CCAAGGCGGA CATCGTTTCC
GAACTTGACT CGAAACTGCA GCAGATAGGG GTCAGGAACG GCTGGACCCA GCCCATCATC
AACCGGATCA ACATGCTCTC CACGGGGGTC CGTACCGACT TGGGCGTCAA GATCTTCGGC
GCCGACCTCA ACGTGCTGAA AGACCTGGCG GTGCAGGCCG AGGGGATACT GAAGACGGTC
CCGGGCGCTG CGGATGTCGT GGCGGAGCGC GTCACCGGCG GCAATTACAT CGACATCGAC
ATCGACCGCG AGGCGGCCGC CCGTTACGGG GTGAACGTCG GCGACATCCA GGAGGTGATC
TCGACAGCTC TTGGAGGAGA GATGCTCTCC ACCGCGGTGC AGGGGCGCAA CCGCTTCCCC
ATCCGGCTTC GCTACATGCG GGAGATGCGC AGCGACATCC CCTCCATACA GCGCATCCTC
GTCTCAGGGA TGGGGGGGGC CCAAGTGCCG CTCTCCCTGG TGACGAAGCT CAAGGTCTCC
ACCGGCGCGC CTGAGATCAA CAGCGAGGGA GGGTTGCTCC GCTCCATCGT CTTCCTGAAC
GTCAGGGGGC GCGACATGGG CGGCTTCGTC AACGAGGCCA AGACCGTGCT GGAAAAGCAG
CTGAAGCTCC CCCCGGGATA CTACGTCGCC TGGTCCGGCC AGTGGGAGAA CCAGGTGCGG
GCCAAGGCGC GCCTCCAGAT GCTGGTGCCT GCCGGTATCC TGATCATCTT CATCCTGCTC
TTTTTCACCT TCCACTCGGC CTTGGAGGCG AGCATGGTCA TGCTCTCGGT ACCGTTCGCG
CTGGTCGGCG GCGTCTACCT GGTCAAGCTG CTCGGCTACA ACATGTCCGT TGCGGTCTGG
GTCGGGTTTA TCGCCCTCTA TGGGATAGCC GTCGAGACAG GGGTGGTAAT GGTCATCTAC
CTGCACGAGG CGCTAGACAA GAAGCTCCTC AAAGGGCCGG TCACGGAACA GGATATCTAT
GACGCCACCT TCGAGGGGGC GGTACTGAGG CTGCGCCCGA AACTCATGAC CGTCGCCGTC
GCCCTCTTGG GCCTGGTCCC GATCATGTGG TCGACAGGCA CCGGCGCCGA CGTGATGAAA
CCGATCGCCG CGCCCATGAT AGGGGGGATG ATCTCTTCGG CCGTCCACGT TCTCATCATG
ACCCCGGTTA TCTTCGTTCT GATGAAGAAG CACGACCTGA AGAAAGGTAA ACTCAAGTAC
TCGGGGATGA AGCACTGA
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| Protein sequence | MIEKIIEYSA RNRVIILMLF ALIIAWGVWS VYKTPVDAIP DLSDNQVIVF TDYPGRSPQV
VEDQVTYPLA VNLQGLPQVR AVRASSAFGF SMIYVIFEDK ADIYWARTRV LERLNYAASL
LPSGVVPTLG PDGTGVGHVF WYTLEGKGYD LEQLRTLQDW FVRYQLNTVP GVAEVASIGG
FVREYQVDLD PNRLFAYNIK VSQVADAIKK SNNDVGGRLL EQADAEFLIR GRGYVKSTAD
LENIVVGADM RGTPIYVKNL GTVQLGGAIR RGMLDMNGEG EAVGGIVVMR YGENAKDVID
RVKEKIVSLE KGLPPGVKIM VSYDRSDLIE RAIDTLKHSL VEESIVVSLV ILVFLLHFQS
ALVIVLTLPI AVLISFITMK LMGVSSNIMS LGGIAIAIGV LVDAGVIMVE NCYRHLSEMP
PEERKEKRLD VIIASAKQVG RAIFFSLAII ILSFVPVFLL EGQEGKMFHP LAFTKTFSMM
GSAFIAITLV PVLMYFLMRG KMPPESSNPV STFFIKMYSP IIRWVLKWKK TTIALNVVAL
AIAIPMFMSI GSEFMPPLDE GSLLYMPVTL PNVSINEAKR LIQVQDTVIK SVPEVEHVLG
KVGRAETSTD PAPVSMFESI IILKPKDKWR AGVTKADIVS ELDSKLQQIG VRNGWTQPII
NRINMLSTGV RTDLGVKIFG ADLNVLKDLA VQAEGILKTV PGAADVVAER VTGGNYIDID
IDREAAARYG VNVGDIQEVI STALGGEMLS TAVQGRNRFP IRLRYMREMR SDIPSIQRIL
VSGMGGAQVP LSLVTKLKVS TGAPEINSEG GLLRSIVFLN VRGRDMGGFV NEAKTVLEKQ
LKLPPGYYVA WSGQWENQVR AKARLQMLVP AGILIIFILL FFTFHSALEA SMVMLSVPFA
LVGGVYLVKL LGYNMSVAVW VGFIALYGIA VETGVVMVIY LHEALDKKLL KGPVTEQDIY
DATFEGAVLR LRPKLMTVAV ALLGLVPIMW STGTGADVMK PIAAPMIGGM ISSAVHVLIM
TPVIFVLMKK HDLKKGKLKY SGMKH
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