Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2126 |
Symbol | |
ID | 6782120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2470855 |
End bp | 2473224 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642768121 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_002138935 |
Protein GI | 197118508 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.279969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACAGA TAAACAAGGT CGCGGTACTG GGGGCAGGGG TCATGGGAGC GGCCATAGCT GCGCATCTGG CCAACGCCGG CATCGAGGTA CTGCTGCTGG ACCTGGTTCC CCCCGACGCC CCGCCCCGGG GAGAGGGAGC GGACCGGGAG CGAAGCCGGA TTGCCACGAA CGCGCTTTCC GCCTTAGCCT CCGCGAAGCC CGCGCCGCTG TACGCGCCGG CCTATGCCGA ATACATCCAC CCCGGCAATT TCGAGGACGA CGCGGCAAGG CTCAAGGAAT GCGACTGGGT GATCGAGGTG GTGCTGGAGA ACCTGGAGGT GAAGCTGAAG CTCTTCGCAG AGCTGGTGGT TCCGAACCTG AAGCCCGACG CCGTTCTTTC CACCAACACC TCCGGGCTCT CGGTGAACGA ACTGGCCCGG GCGCTGCCGG AAGAGGTGAG GCGGCGCTTC ATGGTCACCC ATTTCTTCAA TCCCCCCCGC TACATGCGCC TGATGGAGAT GGTCCCCTGT GCCGAAACCG ACCCGAAAGT GCTGGCCGCG ATGGCGCAAT TCCTGGGGAA GAGGCTCGGT AAGGGGGTGG TCTACGGGAA GGACACCCCG AACTTCATCG CCAACCGCAT CGGCACCTAT GCCGGCTCCG CCGCCTGGCG CCATATGACG AGCATGGGGC TTACCGTCGA GGAGGTCGAC GCCGTCACCG GCCCGGCGCT CGCCCGACCC AAGACCGGCA CCTTCGCCCT TTGGGACCTG GTGGGGATCG ATACGGTGGT CCGGGTGCTC GACAACAGCT ATGCCCTTCT TTCCGGCGAC GACGAGCGCG AACTGCTCCG GGTGCCGGAA GAGATCCGGC GCATGGTCGC CGACGGCCTT ACCGGCAAGA AAGGAAAGGG GGGCTTCTAT CGTCGCGAGA CCGTAGAAGG GGAAAGCGTG AAGGTTTGCT ACGACTACCA TAGCGGCAGC TACAACCCCT GCGTCCGTCC CAAGTTCGCC TCGGTGGCCG CCGCCAAACA GATCGACGAC CCGGCGCAGC GCGTGAGGAC TCTTCTATCC GGTGGGGATC GCGCGGCTCA ATTCGCCTGG CTCACCCTGC GGGACACCTT GATCTACGTA GTGAAGAGGC TTGCCGAAAT CGCCGACGAC GTGGTCAACG TCGATAACGC CATGAAATGG GGTTACAACT GGGAGCTCGG CCCCTTCGAA TTGCTGGACG CCCTCGGGGT CGCCGAGTTC GTCTCCCGCT GCGAGCGCGA CGGCGTTGCC CTGCCGGACT GGCTCAAAGA GGTGCAGAGC TTCTACCGGG TCGAGGGGGG CAAAAAGTTC CAGTACCTCC CGGAAAAGCA CGATTTTGCG GAAATACCGA GGCCCGAGGG AAGCGTCTCG CTCACCCTTT TGAATAGCGC CGGCGGCGAG GTGGAGCGAA ACTCAGCCGC TTCGCTCATC GACATAGGGG ACGGCGTATT CTGCCTCGAA TTCCATTCCA AGCTGAACAC CATGGGGGGG GAGACGCTCG CCATGATCCA GAAGGGGATC CGGCGCGCCG AGGCCGACGG GGTCGGGATG GTCATCGCCA ACGAGGGGGG GGCGTTCTCC GCCGGCGCCA ACCTGATGCT CGTCGCCATG GCGATAGCGG AAGGGGCCTG GGACGACTTA GCCCTCACCG TAAAGGCCTT CCAAAAGGCG ATGATGTCCA TCAAGTACTC GAAGGTTCCG GTGGTCGCCG CTCCCCACGG CCTAGCCATG GGAGGGGCGT GCGAGACCTG CCTGCACGCC GACGCCATCA ACGCCCATGC CGAGACCTAC ATGGGGCTGG TGGAGATCGG CGTAGGGCTG ATCCCGGCCG GCGGCGGCAC CAAGGAGATG GCCATCAGGG CGGTCAGGCT TGCCGAGGAG AACGGGGCCG ACGTCCAGCC CTTTTTGTTC CGCAACTACC AGAACATCGC CATGGGCAAG GTGAGCAGTT CCGCTGCCGA ACTGCTGACG CTGGGGCTTA TGCGGCAGGG GGACGGCATC ACGCTCGACC TGGACCGGCG CATCCACGAC GCCAAGCTGA AGGCGATAGC GCTCGCCGCG AACTACCGGC CGGGGCGCCC GTCAACCGGC ATCAAGGCGC CCGGTAAAAG TGTCGCCTCC AGCATCAAGG TGCAGCTTTG GAACCTTGAG CGCGGCGGCT TCATTTCCAG CTACGACAGC TACCTCGCCT CAGGCATAGC CGACGTCATC ACCGGCGGCG ACGTCCCCGG CGGCACCCTC ATCACCGAAG AGTACCTGTT GGAGCTGGAG CGCGAGATGT TCCTCAAGTT CTGCGGCCAG AAGAAGACCC TGGAGCGCAT CCAGCACATG CTGAAAAAAG GGAGGCCTCT CAGGAACTAG
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Protein sequence | MRQINKVAVL GAGVMGAAIA AHLANAGIEV LLLDLVPPDA PPRGEGADRE RSRIATNALS ALASAKPAPL YAPAYAEYIH PGNFEDDAAR LKECDWVIEV VLENLEVKLK LFAELVVPNL KPDAVLSTNT SGLSVNELAR ALPEEVRRRF MVTHFFNPPR YMRLMEMVPC AETDPKVLAA MAQFLGKRLG KGVVYGKDTP NFIANRIGTY AGSAAWRHMT SMGLTVEEVD AVTGPALARP KTGTFALWDL VGIDTVVRVL DNSYALLSGD DERELLRVPE EIRRMVADGL TGKKGKGGFY RRETVEGESV KVCYDYHSGS YNPCVRPKFA SVAAAKQIDD PAQRVRTLLS GGDRAAQFAW LTLRDTLIYV VKRLAEIADD VVNVDNAMKW GYNWELGPFE LLDALGVAEF VSRCERDGVA LPDWLKEVQS FYRVEGGKKF QYLPEKHDFA EIPRPEGSVS LTLLNSAGGE VERNSAASLI DIGDGVFCLE FHSKLNTMGG ETLAMIQKGI RRAEADGVGM VIANEGGAFS AGANLMLVAM AIAEGAWDDL ALTVKAFQKA MMSIKYSKVP VVAAPHGLAM GGACETCLHA DAINAHAETY MGLVEIGVGL IPAGGGTKEM AIRAVRLAEE NGADVQPFLF RNYQNIAMGK VSSSAAELLT LGLMRQGDGI TLDLDRRIHD AKLKAIALAA NYRPGRPSTG IKAPGKSVAS SIKVQLWNLE RGGFISSYDS YLASGIADVI TGGDVPGGTL ITEEYLLELE REMFLKFCGQ KKTLERIQHM LKKGRPLRN
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