Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2125 |
Symbol | |
ID | 6782119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2469015 |
End bp | 2470826 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642768120 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002138934 |
Protein GI | 197118507 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00466238 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGG TTCCTTACCG GTCGATACCG GACATGCTCA GACATAGCGC CGCTCAATAC CAGACGCTTA ACGCCGTCGA GTTCAGAAAG AACGGACAGT GGGTCACCCT GAGCTACGCC CAGTTCTACA ATCGGGCGCT CATGGTGTCG CGGGGGCTGC GCAAGCTGCG GATGAAACCC GGGGACAGGA TCGCCATCTT GTCCGAGAAC CGCGCCGGGT GGATCATCGC CGACATGGGC ATCCTTTGCG GCGGCGGCGT CACCGTCCCG GTCTATGCCA CCGGCACTCC GGACCAGATA GCCTATGCGC TTTCCAGTTG CGAGGCGCGC ATCGTCTTCG TCTCCGGCAA GGTGCAATAC CGGAAGCTGC TCCAGGTGCG GGACGCGCTG CCCCATCTGG AACACGTCAT CTCCTTCGAG CGCTTCCTAG GCGAAGCGGC GCTGCCGGTT ACGACCTTCT ACCAGCTGAG CGAGGTGGAC GACCCCATCC TCGACACCGA AAGGGCCGAG ATCGATTCGG TGATCGACTC TCTTACCCCG GAAATGCCGG CCACCATCAT CTACACCTCG GGTACGACCG GCACCCCCAA GGGGGCCGTG CTCACGCACG GCAACCTCGT TTTCGACGTC TGGGCCACTC TCGACAAGGT CGGGGGGGTG GGGCAGGAGG ACCTCTTCCT GAGTTTTCTC CCCCTAAGCC ACGTATTCGA GCGCAGCGTC GGGTACTATC TCCCCCTTTC CTGCGGCGCC GCCATCGCCT TCGCCGACAG CATGGAGAAG ATCTCGGAGA ACATGATGGA GCTGCACCCG ACCATCATGG TCTGCGTGCC GAGGTTCTTC GAGAAGATCT ATTCCCGCAT CTACGAAGCG GTGCATCAGC TCTCCCTTTT CAAGAGGAAG ATGTTTCGGC GCGCCCTTGC CGTCGGGCGC AGCTACGTCT ACGCGCGCTA CATAGACAAG TACGTGCCGT TTTGGCTTTC CTTCCAGCAC GCGATCGCGG ACCGGCTGGT ATTCAGCAAG CTGCGCAGCC GCTTCGGCGA CCGCCTCAAG TTCTGCGCCA GCGGCGGAGC CCCCCTGGAC CGGGAAATCA ACGAGTTCTT CTGGATCATC GGCGTCCCGG TCTTCGAGGG GTACGGCCTC ACCGAGACGA GCCCGGTCCT TTGCAGCAAC AGCTATAACG GCCTGCGCTT CGGGTCGGTG GGGACCCCTC TTGCCTTCAC CGAGATCGCC ATAGCAGGCG ACGGCGAGGT GCTGGCGCGC GGCCCGCAGG TCATGGCCGG CTACTATAAC GACGAGGCCG CGACGAAGGA GGCGCTGGTC GACGGCTGGT TCAGGACCGG CGACATCGGC CGCTTGGAGG AAGGCTTCCT CTATATCACC GACCGCAAAA AGGATCTGAT CGTCACCGCC GGAGGGAAGA ACATCGCCCC CCAGCCGATC GAGAACCTCC TGAAGCGGGA CAAGTACATC TCCCAGGCCT ACGTATACGG CGACAGGAAG CCATACCTGA CGGCACTTCT GGTCCCGACC CTGGAAAGGC TTTTGGAATT CGCCCAGGAA CGCAGAATCG CCTACCACGA CCTGGAAGAC CTGGTCGTGC ACCAGCCGGT GATCGAGCTG TACAAAAGCC GCGTCGAGGC TGTCAACAAC GAGCTTGCCC CCTTCCAGAC CATCAAGAAG TTCGCGCTCT TGCCGCGCGA CTTCACCATG GACAGCGGCG AGCTGACCCC GACCCTCAAG GTGAAACGGC AGGTAATCTC GGAGAGGTAC CGGGACCAGA TAGACCATCT CTACAACGGC AGCGAATCGT AA
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Protein sequence | MEKVPYRSIP DMLRHSAAQY QTLNAVEFRK NGQWVTLSYA QFYNRALMVS RGLRKLRMKP GDRIAILSEN RAGWIIADMG ILCGGGVTVP VYATGTPDQI AYALSSCEAR IVFVSGKVQY RKLLQVRDAL PHLEHVISFE RFLGEAALPV TTFYQLSEVD DPILDTERAE IDSVIDSLTP EMPATIIYTS GTTGTPKGAV LTHGNLVFDV WATLDKVGGV GQEDLFLSFL PLSHVFERSV GYYLPLSCGA AIAFADSMEK ISENMMELHP TIMVCVPRFF EKIYSRIYEA VHQLSLFKRK MFRRALAVGR SYVYARYIDK YVPFWLSFQH AIADRLVFSK LRSRFGDRLK FCASGGAPLD REINEFFWII GVPVFEGYGL TETSPVLCSN SYNGLRFGSV GTPLAFTEIA IAGDGEVLAR GPQVMAGYYN DEAATKEALV DGWFRTGDIG RLEEGFLYIT DRKKDLIVTA GGKNIAPQPI ENLLKRDKYI SQAYVYGDRK PYLTALLVPT LERLLEFAQE RRIAYHDLED LVVHQPVIEL YKSRVEAVNN ELAPFQTIKK FALLPRDFTM DSGELTPTLK VKRQVISERY RDQIDHLYNG SES
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