Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2023 |
Symbol | |
ID | 6782017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2328846 |
End bp | 2330267 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642768018 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_002138832 |
Protein GI | 197118405 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAAAG AAATGAAGTA CACGCAACGG ATTCTGCTCA TCGACGACGA GGCGCAGATA CTGGAAACCT GCCGGAGCTG CCTCAACAAC GCCGGGCACG CCGATGTAGT CATCGAAAAC GACAGCAGCA AGGTGATGTC GCTTCTTTCC AGAGAAGAAT TCGCCGTCAT CGTCCTGGAC CTGCGCATGC CGAACCTCTC CGGGTTCGAA CTCCTGCCGC AGATAATCTC GCAACACCCT CAGATCAAGG TGATAGTCGC CACCGCCAAC AACGACGTCG AAACCGTGGT GAATTGCATC AAGGAGGGGG CCTTCGACTA CCTGGTGAAG CCCATTGACG TAAAGCGGCT GATCACCTCG GTCAGGAAAG CCCTGGAGAT GCGCTCCCTC GCCAACGAGC TCACCGCCTT GAAGCAGTAC ATGTTCACCG ACCGGTTGGA CCATCCCGAG GCCTTCCGGA GCATCGTCAC CGGCAACAAG GCGATGCGGG CCATCTTCCA GTACCTCGAG GTGATTTCCG GCACTAGGCA GGCGGTAACG ATTACCGGCG AGACCGGCAC CGGCAAGGAG CTGATAGCCC GGGCGATCCA CAACCTGAGT GGCTGCAGCG GCGAGTACGT GGCGCTCAAC GTGGCAGGGC TCGACGACAA CATGTTTTCC GACACCCTTT TCGGTCACAG GAAAGGCGCC TTCACCGGCG CCGACCAGGC CCGGGACGGC CTGATCACCC GCGCCTCCGG AGGGACGCTC TTTTTAGACG AGATAGGCGA CCTCAACGAG ATGTCGCAGA TCAAGCTCTT GAGGCTTTTG CAGGAGCAGG AGTACTACCC CGTCGGCTCC GACTTCATCA AGAAGAGCGA CGCGCGTCTG GTGCTCGCCA CCAACCGCGA CCTTCAGGAG CTGATCAAGC AGGGGAAATT TCGCAACGAC CTCTACTACC GGCTCTGCGG GCACCGGGTG CATCTCCCCC CGCTGCGGGA CAGGCTGGAC GACATTCCGC TCCTTTTGGA ACACTTCCTG GGAAGCGCCG CCGACTGCCT GGGCAAGAAG AAGCCGACCC CTCCCCCCGA GCTTGCCGTC ATGCTCGCGC TTTACCACTT CCCTGGCAAC ATCCGGGAGT TGGAGGCGCT CGTGTTCGAC GCCGTCTTGC GGCACAACTC CGGCATTCTC TCCATGGAGA CCTTCCGCGG CGTCATCGGC CACGAGCGCC CCTTGCCGAC TCTCGACTGT TCCACACCGG CCGCCGCAGG CGAGAATCCG CTCTGCGGCA TCTTCGGGCA CTTCCCGACT TTGGACGAAG TGGAGCAGTA CATGATCGCC GAGGCGATGA AGCTGGCCAA AGGGAACCAG GGGTTAGCCG GAAAGATCCT GGGCATGGGG CGCCAGACCC TGAACAAGCG GCTGAAGCTG CAGGCGTCGT AA
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Protein sequence | MNKEMKYTQR ILLIDDEAQI LETCRSCLNN AGHADVVIEN DSSKVMSLLS REEFAVIVLD LRMPNLSGFE LLPQIISQHP QIKVIVATAN NDVETVVNCI KEGAFDYLVK PIDVKRLITS VRKALEMRSL ANELTALKQY MFTDRLDHPE AFRSIVTGNK AMRAIFQYLE VISGTRQAVT ITGETGTGKE LIARAIHNLS GCSGEYVALN VAGLDDNMFS DTLFGHRKGA FTGADQARDG LITRASGGTL FLDEIGDLNE MSQIKLLRLL QEQEYYPVGS DFIKKSDARL VLATNRDLQE LIKQGKFRND LYYRLCGHRV HLPPLRDRLD DIPLLLEHFL GSAADCLGKK KPTPPPELAV MLALYHFPGN IRELEALVFD AVLRHNSGIL SMETFRGVIG HERPLPTLDC STPAAAGENP LCGIFGHFPT LDEVEQYMIA EAMKLAKGNQ GLAGKILGMG RQTLNKRLKL QAS
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