Gene Gbem_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2023 
Symbol 
ID6782017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2328846 
End bp2330267 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content61% 
IMG OID642768018 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002138832 
Protein GI197118405 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAAG AAATGAAGTA CACGCAACGG ATTCTGCTCA TCGACGACGA GGCGCAGATA 
CTGGAAACCT GCCGGAGCTG CCTCAACAAC GCCGGGCACG CCGATGTAGT CATCGAAAAC
GACAGCAGCA AGGTGATGTC GCTTCTTTCC AGAGAAGAAT TCGCCGTCAT CGTCCTGGAC
CTGCGCATGC CGAACCTCTC CGGGTTCGAA CTCCTGCCGC AGATAATCTC GCAACACCCT
CAGATCAAGG TGATAGTCGC CACCGCCAAC AACGACGTCG AAACCGTGGT GAATTGCATC
AAGGAGGGGG CCTTCGACTA CCTGGTGAAG CCCATTGACG TAAAGCGGCT GATCACCTCG
GTCAGGAAAG CCCTGGAGAT GCGCTCCCTC GCCAACGAGC TCACCGCCTT GAAGCAGTAC
ATGTTCACCG ACCGGTTGGA CCATCCCGAG GCCTTCCGGA GCATCGTCAC CGGCAACAAG
GCGATGCGGG CCATCTTCCA GTACCTCGAG GTGATTTCCG GCACTAGGCA GGCGGTAACG
ATTACCGGCG AGACCGGCAC CGGCAAGGAG CTGATAGCCC GGGCGATCCA CAACCTGAGT
GGCTGCAGCG GCGAGTACGT GGCGCTCAAC GTGGCAGGGC TCGACGACAA CATGTTTTCC
GACACCCTTT TCGGTCACAG GAAAGGCGCC TTCACCGGCG CCGACCAGGC CCGGGACGGC
CTGATCACCC GCGCCTCCGG AGGGACGCTC TTTTTAGACG AGATAGGCGA CCTCAACGAG
ATGTCGCAGA TCAAGCTCTT GAGGCTTTTG CAGGAGCAGG AGTACTACCC CGTCGGCTCC
GACTTCATCA AGAAGAGCGA CGCGCGTCTG GTGCTCGCCA CCAACCGCGA CCTTCAGGAG
CTGATCAAGC AGGGGAAATT TCGCAACGAC CTCTACTACC GGCTCTGCGG GCACCGGGTG
CATCTCCCCC CGCTGCGGGA CAGGCTGGAC GACATTCCGC TCCTTTTGGA ACACTTCCTG
GGAAGCGCCG CCGACTGCCT GGGCAAGAAG AAGCCGACCC CTCCCCCCGA GCTTGCCGTC
ATGCTCGCGC TTTACCACTT CCCTGGCAAC ATCCGGGAGT TGGAGGCGCT CGTGTTCGAC
GCCGTCTTGC GGCACAACTC CGGCATTCTC TCCATGGAGA CCTTCCGCGG CGTCATCGGC
CACGAGCGCC CCTTGCCGAC TCTCGACTGT TCCACACCGG CCGCCGCAGG CGAGAATCCG
CTCTGCGGCA TCTTCGGGCA CTTCCCGACT TTGGACGAAG TGGAGCAGTA CATGATCGCC
GAGGCGATGA AGCTGGCCAA AGGGAACCAG GGGTTAGCCG GAAAGATCCT GGGCATGGGG
CGCCAGACCC TGAACAAGCG GCTGAAGCTG CAGGCGTCGT AA
 
Protein sequence
MNKEMKYTQR ILLIDDEAQI LETCRSCLNN AGHADVVIEN DSSKVMSLLS REEFAVIVLD 
LRMPNLSGFE LLPQIISQHP QIKVIVATAN NDVETVVNCI KEGAFDYLVK PIDVKRLITS
VRKALEMRSL ANELTALKQY MFTDRLDHPE AFRSIVTGNK AMRAIFQYLE VISGTRQAVT
ITGETGTGKE LIARAIHNLS GCSGEYVALN VAGLDDNMFS DTLFGHRKGA FTGADQARDG
LITRASGGTL FLDEIGDLNE MSQIKLLRLL QEQEYYPVGS DFIKKSDARL VLATNRDLQE
LIKQGKFRND LYYRLCGHRV HLPPLRDRLD DIPLLLEHFL GSAADCLGKK KPTPPPELAV
MLALYHFPGN IRELEALVFD AVLRHNSGIL SMETFRGVIG HERPLPTLDC STPAAAGENP
LCGIFGHFPT LDEVEQYMIA EAMKLAKGNQ GLAGKILGMG RQTLNKRLKL QAS