Gene Gbem_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2004 
Symbol 
ID6781997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2308798 
End bp2309457 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content57% 
IMG OID642767998 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_002138813 
Protein GI197118386 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000255672 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAAC TGTTGATTGT TGCTCTTGTT GCATTAACCG CTGTACCGTC CTTTGCTGCA 
GATGAAAAGA AAGCGGAAGA ACTGAAGACC TTTTATGCCA TAGGGCAGGT CATGGCTCGC
CAGCTAGGCG TCTTCAGCCT GGCACCTGAC GAATTGACCC AGGTGAAGAA GGGGCTCGAT
GACGGCATCG AAGGGAAGTC GCAAGTGGAC ATGGAGGCTT ACAAGACGAA GATCCAGCAG
CTCGCCGTCG AGCGTCGCAA CGCGCAGGGC GAGAAGCTTG CCGCACAGTC CAAGGAGTTT
GTTGAAAAAG CTGCCAAAGA GAAGGGTGCT GTGAAGACTC CCTCCGGTCT CATTTACAAG
TCGCTCAAGG AAGGGACGGG GGCCGGCCCG GCTGCCACCG ACAAGGTGAA GGTCAACTAC
CGCGGGACGC TGATCGACGG CAAGGAGTTC GACAGTTCCG CTGCAGCAGG CAAGCCTGCC
GAATTCAGGC TGGACCAGGT CATCAAGTGC TGGACCGAAG GCGTACAGAA GATGAAGGTC
GGCGGCAAGG CACAGCTTGT ATGTCCTCCT GATCTGGCCT ACGGCGAGCG CGGTTCCGGG
ATCATCCCTG CCAACGCCAC CCTGATCTTC GAAGTGGAAC TTCTCGACGT AGTCAAGTAG
 
Protein sequence
MRKLLIVALV ALTAVPSFAA DEKKAEELKT FYAIGQVMAR QLGVFSLAPD ELTQVKKGLD 
DGIEGKSQVD MEAYKTKIQQ LAVERRNAQG EKLAAQSKEF VEKAAKEKGA VKTPSGLIYK
SLKEGTGAGP AATDKVKVNY RGTLIDGKEF DSSAAAGKPA EFRLDQVIKC WTEGVQKMKV
GGKAQLVCPP DLAYGERGSG IIPANATLIF EVELLDVVK