| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1989 |
|---|
| Symbol | |
|---|
| ID | 6781980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2293885 |
|---|
| End bp | 2294958 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642767981 |
|---|
| Product | glycosyl transferase family 9 |
|---|
| Protein accession | YP_002138798 |
|---|
| Protein GI | 197118371 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGCAA CCCTGTTGAA ACGACTCGAC GCCGCGGTGG GTCCGCTCTT TACCCGGCTC
CTTCCCAAGA GGCGTTTGCC CGACACTCAC TTTTCCCCCC GAAGTTTCCT GGTCATCCGT
CCCGGCGGCA TCGGCGACGC GGTCCTCCTG GTCCCGGCGT TGTCGGCGCT GCAAAAAGCT
TTTCCCGGCT GCCGCATCGA CGTTCTCGCC GAAAGCCGCA ATGCCGCCGC CTTTCTCATG
TGCCCCGGGC TGAACCGGGT GTACCGCTAC GATTCCCTCT CCGACATAAC GGCTTTGTTC
AGCACCTCTT TCGACGTGGT GATCGACACC GAGCAGTGGT ACCGCCTCTC CGCCGTGATC
GCGAGGCTGG TCGGCGCCCT GCGCTCCATC GGGTTTTCAA CCAACGACCG GGGGAGGCTC
TTCACCGACC CCGTGCCTTA TCCCTTGCAG GATTACGAAC TCATCTCCTT CTTCAAGCTC
CTAGCCCCGC TGGAGGTGCA GCCCCCCAAG GAATCTGCGG CTCCCTTCCT CCAACTCCCC
GCCGGGGCGA AGGAAGGGGC GCGGCGGCTC TTGGCCCCGC TGGCGGGGAA GGCGTTTGTC
GCCATTTTCC CCGGAGCTAG CGTACCCGAG AAGCAATGGG GGAGGGAGAA CTTCCGGCAG
GTGGCGGAGA GCTTAACCGC GGCGGAGATC GCGGTGGTGG TGGTCGGCGC CGACGACGCC
CGCGCCTCGG GCGACTTCAT TGCCCGCGGC GGTCTTGCCC TGAACCTGGC GGGTAAGGGG
GGGCTCATGG AAAGCGCCGC TGTCCTCGCC GAGGCGCGGG TCCTTTTAAG CGGCGACTCA
GGGCTTTTGC ACATCGCCGC AGGGCTTGGC ACCGCGACCG TTTCGCTTTT CGGCCCCAGC
GACGCGGCCA AGTGGGCTCC CAAGGGCGAG CGGCACACGG CATTTTCTTC GTCCCTTTCC
TGTGCTCCCT GTTCCAGGTA CGGAACCATC CGCTGCAGCA CCGGCGCGCG CTGTCTCGAC
GCCGCGCCGA CTGAAGTGAC TGCAGCCGTG CTGAGGTTGT GTAAGTGGCG CTAA
|
|---|
| Protein sequence | MKATLLKRLD AAVGPLFTRL LPKRRLPDTH FSPRSFLVIR PGGIGDAVLL VPALSALQKA
FPGCRIDVLA ESRNAAAFLM CPGLNRVYRY DSLSDITALF STSFDVVIDT EQWYRLSAVI
ARLVGALRSI GFSTNDRGRL FTDPVPYPLQ DYELISFFKL LAPLEVQPPK ESAAPFLQLP
AGAKEGARRL LAPLAGKAFV AIFPGASVPE KQWGRENFRQ VAESLTAAEI AVVVVGADDA
RASGDFIARG GLALNLAGKG GLMESAAVLA EARVLLSGDS GLLHIAAGLG TATVSLFGPS
DAAKWAPKGE RHTAFSSSLS CAPCSRYGTI RCSTGARCLD AAPTEVTAAV LRLCKWR
|
|---|
| |