Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1961 |
Symbol | |
ID | 6781951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2264474 |
End bp | 2266072 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642767953 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_002138771 |
Protein GI | 197118344 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.829673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTA TCGTAACCGA TGAAGTGGCT CAGGAAGGAC TGGCACTTTT GCAGCGCGAC CCGCGCGTGC AGATGGACAT CAAGCTGGGA CTGAAGAAGG AAGAGCTTTA CTCGATCATT GGTGATTACG ACGTTATCAT CACCAGAAGC GGCACCACCG TGGACAAGCC CCTGCTTGAC GCAGCGACCA ACCTGAAAAT GGTGGCGCGC GCCGGCGTCG GCGTCGACAA CGTGGATGTC GACTATGCCT CCGCCAAGGG CGTCATCGTC GTCAATGCAC CTTTCGGCAA CACCAACAGC GCGGCGGAAC ACGCCATGGC GCTGCTGCTT TCCTTCTGCC GCAATATCAC CAAGGCTAAC TCGTCCCTCA AAGGTGGCGC CTGGAAGCGT GCCCCCTTCA CCGGCTACGA ACTTAAAGGG CGCACCGCCG GCGTCATCGG TCTGGGCAAG GTAGGGGGAA GGGTGGCTAC CCGCCTCAAG GCCTTCGAGT GCGAAGTGCT CGCCTGCGAC CCGTACATCG CAGAGAAAAG GGCGCACGAC CTCGGCGTCA AGCTGGTTTC GCTGGATGAA ATCGTCCGCG TCTGCGACAT CATCACCGTC CACACCCCGC TCACCGCGGA GACCAGCAAC ATGATCGGCA AGAAAGAGCT CGCCGCCATG AAGGAAGGGG TCATCGTCAT CAACGCGGCG CGCGGCGGCA TCATCAACGA GGAGGCGATG CTGGAGGCGC TCGATTCCGG CAAGGTAACC GGCGCAGCCT TCGACGTCTG GAGCCAGGAG CCCCCCGACA CCGATACCCT GAAAAAGCTG ATCGGGCACG AGAAGATGGT GGTCACGCCG CACCTGGGCG CCAACACCTT CGAAGCGCAG GTGAACGTGG CGGTGGACGT CTCCCGTGAG ATCATCCACT ACCTGGACGA GCAGCCGCTG GAGAACGCCA TCAACATCCC GAGGTTCGAC GCAGCCCTCA TGGGGCAGAT GCGTCCTTAC CTGAACCTGA TGAACGTCCT GTCCGATTTC GTCATCCAGT TGGTGGACAC CAACCTGAAC AAGATCACCT TCACCTATAC CGGCAACCTC GCCCAGTACG ACTGCACGCC GATCACCGTC CTTGGTCTCG CGTCGCTTCT GAACCGCAGG GTCGAGCAGG ACGTGAACAT GGTCAACGCG CAGCTTGTCG CGGACAACAT GGGGATCGTC GTGGAAGAGG TGAAGTCCAA CCAGGCCGAG GCCTTCTCCA ACATGATCAC CATCGCCATC GAGGGCCCCG GCGAAAAGAG GCTCATCAGC GGTACCTTGT TCGAAGGGAT TCCGCGCATC GTCAAGCTGC GCGACTACCA GATGGACTTC CGCCCCGAAG AGCACATGCT GCTCATGGCT TACGGCGACC GTCCGGGCAT CATCGGCAAG ATCGGCACCA TCCTGGGCAC CCATGAGATC AACATCGCCT CGATGAACCT GGGGCGTCGC GAGAAGAAAG GGGAGGCGAT GGTCATCCTC TCCCTCGATT CCGCCGTGAC CCCGGAAGTC GTGGAAGAGG TGCGAGGCGC CACCGATGCG ACCTTCGTCA AACCGCTCTA CCTGGTGACC GCGAAGTAG
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Protein sequence | MKIIVTDEVA QEGLALLQRD PRVQMDIKLG LKKEELYSII GDYDVIITRS GTTVDKPLLD AATNLKMVAR AGVGVDNVDV DYASAKGVIV VNAPFGNTNS AAEHAMALLL SFCRNITKAN SSLKGGAWKR APFTGYELKG RTAGVIGLGK VGGRVATRLK AFECEVLACD PYIAEKRAHD LGVKLVSLDE IVRVCDIITV HTPLTAETSN MIGKKELAAM KEGVIVINAA RGGIINEEAM LEALDSGKVT GAAFDVWSQE PPDTDTLKKL IGHEKMVVTP HLGANTFEAQ VNVAVDVSRE IIHYLDEQPL ENAINIPRFD AALMGQMRPY LNLMNVLSDF VIQLVDTNLN KITFTYTGNL AQYDCTPITV LGLASLLNRR VEQDVNMVNA QLVADNMGIV VEEVKSNQAE AFSNMITIAI EGPGEKRLIS GTLFEGIPRI VKLRDYQMDF RPEEHMLLMA YGDRPGIIGK IGTILGTHEI NIASMNLGRR EKKGEAMVIL SLDSAVTPEV VEEVRGATDA TFVKPLYLVT AK
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