| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1944 |
|---|
| Symbol | |
|---|
| ID | 6781934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2248094 |
|---|
| End bp | 2248987 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642767936 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002138754 |
|---|
| Protein GI | 197118327 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATT TCCTTAATAG CTTGGTCGGC GCCGTCGACC CGTACATGAT GCAGATCCTG
GTCAACATCG GCATCGCTAT CGTGCTGGCG CTGGGGCTCA ACGTGATCGT CGGTCTCACC
GGGCAGCTGT CGCTGGGGCA CGCTGCCTTC ATGAGCATTG GAGCCTTCAC CAGCGCCATG
GTCACCATCA AGACCGGACT CCCCTTCAGC ATGAACCTCC TGGTCACCGG CGTGGTCACC
GGCATCGTGG CTGCCGCCAT CGGCTTCCCG ATCCTGAGGC TGACCGGCGA CTATCTCGCC
ATCTGCACCC TGGGCTTCGC CGAGATCGTG AAGGTGTTCT TCCTGAACTT CGAGCCGACC
AACAAGGCGC TCGGCCTCAC GGTCCCCCCG GCGAAGACCA TGATCCCCAT GCCGATCTAC
GTATGGGTGG TGGCTATCCT TTCCATCGTG CTGGTCACCT TCGTGCAGTC CTCCCGGTTC
GGGCGGGCGC TGAAGGCGAT CCGCGAGGAC GAGATCGCAG CCGAGGCGAT GGGAATCAAC
ACCGCACGCT ACAAGATCCA GGCCTTCGCG CTCGGCTCCT TCATGGCCGG GGTCGGCGGC
GGCCTTTACG CCCACTTCCT GAGCTACATC AACCCCTCGG ACTTCGGCTT CCTCAAATCG
GTCGATATTC TCGCCATGGT GGTATTGGGC GGCCTGGGGA GCGTCCCCGG CACGGTCATC
GGCTCGTCCT TGCTTGCCTC GGCGCCCGAG TTCCTGCGCT TCATGTCCCA GTACCGCATG
CTGGTCTACG GCGCGCTGCT GGTCTTCTTG ATGGTGTTCC GCCCCAACGG GCTTCTGGGC
GGCGTCAACT TCACGGAACT GCTGCTGCGG GCCATCGGCA AGAAACGTAA ATAA
|
|---|
| Protein sequence | MADFLNSLVG AVDPYMMQIL VNIGIAIVLA LGLNVIVGLT GQLSLGHAAF MSIGAFTSAM
VTIKTGLPFS MNLLVTGVVT GIVAAAIGFP ILRLTGDYLA ICTLGFAEIV KVFFLNFEPT
NKALGLTVPP AKTMIPMPIY VWVVAILSIV LVTFVQSSRF GRALKAIRED EIAAEAMGIN
TARYKIQAFA LGSFMAGVGG GLYAHFLSYI NPSDFGFLKS VDILAMVVLG GLGSVPGTVI
GSSLLASAPE FLRFMSQYRM LVYGALLVFL MVFRPNGLLG GVNFTELLLR AIGKKRK
|
|---|
| |