Gene Gbem_1929 details

Gene Information

• Locus tag: Gbem_1929
• ID: 6781919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 2230440
• End bp: 2231198
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642767921
• Product: protein of unknown function DUF6 transmembrane
• Protein accession: YP_002138739
• Protein GI: 197118312

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00124524
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCCTC TTGCCTTGGC ACGCGCTAAT AGATTAAACG CCCGCCTTCT CTTGAGCGGT 
TGCGTGCTGG GCATTCTGCT TTTTGCCTCC TACGCCTTTC AGACCATGGC GCTGCAGTAC 
ACCAGCGCAT CTAACACCGG CTTCCTTACC GGTCTGAACG TGGTGCTGGT CCCCCTGTTC 
GGCGCGCTCC TCTTCCGGTT GCCTGCAGGC CCTGGCATCC GCTGGGGCGT AGCTCTTGCG 
ACGCCCGGGC TTTTTCTCCT CTGCGGCAAC GGCACTCTCA GTTTTAACTA CGGCGACATC 
CTTGCCGCCA TCTGCGGTGC CTGCGTCGCG CTGCATCTTC TTTACACCAG CCACTTTTCC 
CGACAGGCCT CAAGCGACGT CTACCTTCTG ACCACATTGC AGCTCACCGT GGTCGGGCTC 
TTGAGCCTCG CGACAGCTAC GGCGCGCGGC AAGGAGGTTT TCGTCTGGCA TCCGGAACTT 
TTATGGACCC TGGTGGTCTG CGTGCTGATC GCCACCGTCT TCGCTTTCCT GGTGCAGACC 
ACGATGCAGA AGTTCATCAG CCCGGCCCAC ACCGCCCTCA TCTTCTGCAC CGAACCGGTA 
TTCGCTGCCG GCTACGCCTA TTACGCCGCA GGCGAGCGGC TGGGCTTTTT CGGGATGACG 
GGGGCGGCGC TGATTTTCGC AGGGATGATC GTCTCCGAGC TGCTGCCGGA CGAGGGGAAA 
GAAGAAGCTG AATCGGCCGC CGTTGTCGCT GAAGGATAG 

 

Protein sequence

MLPLALARAN RLNARLLLSG CVLGILLFAS YAFQTMALQY TSASNTGFLT GLNVVLVPLF 
GALLFRLPAG PGIRWGVALA TPGLFLLCGN GTLSFNYGDI LAAICGACVA LHLLYTSHFS 
RQASSDVYLL TTLQLTVVGL LSLATATARG KEVFVWHPEL LWTLVVCVLI ATVFAFLVQT 
TMQKFISPAH TALIFCTEPV FAAGYAYYAA GERLGFFGMT GAALIFAGMI VSELLPDEGK 
EEAESAAVVA EG