Gene Gbem_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1898 
Symbol 
ID6781888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2197742 
End bp2198866 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content61% 
IMG OID642767890 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_002138708 
Protein GI197118281 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAG TACTTGCTCT GGCGGACGGC CGGATTTTCA AGGGTAAGGC CTTCGGTGCG 
ACGGGCGAAA CAAGCGGCGA GGTGGTGTTC AATACCGCCA TGTCCGGCTA TCAGGAAGTC
CTCACCGACC CTTCCTACAA GGGGCAGATG GTCACCATGA CCTACACCCA GATCGGCAAC
ACCGGCATCA ACCCGGAAGA TGTGGAAAGC GGGCAGCTCT ACCTGTCCGG CTTCATCGTC
AGGGAGTACC TGGACTGCTA TTCCAACTAC CGCGCCACCA TGAGCCTGGA CGCTTACCTC
AAGGAGAACG GCATCGTCGG CATCCAGGGG ATCGACACCC GCGCCCTGAC CCGCCACCTG
CGCGACAAGG GGGCCCAAAA CGGCATCATC TCCACCATCG ACTTCGATCC GGAGAGCCTG
GCCAGGAAGG CGCGCGCCAT CCCCTCCATG AGCGGTCTGG ACCTTGCCAC CGGCGTCACC
TGCAGCGCCC CGTACCACTG GACCGAAGGT CTGTGGGACC TGAAGAGCGG CTACCCGCAG
GTCGACCGCA AGGATTTGAA GTACAAGGTC GTGGCCTACG ACTTCGGCAT CAAGCTGAAC
ATCCTGCGCT GCCTGGTTTC CGCCGGTTGC GACGTCACCG TGGTTCCGGC GACCTTCCCT
GCGGAGTCCG CGCTCGCCAT GAATCCGGAC GGCATCTTCC TTTCCAACGG CCCGGGCGAC
CCTGAGCCGA TGAAGGAAGT CATCGAGAAC ATCAAGAAAT TCGTCGGCAA GAAGCCGATC
TTCGGCATCT GCCTTGGACA CCAGCTCATG GGCCTTGCCC TGGGCGGCCG CACCATCAAG
CTCAAGTTCG GCAACCACGG CTCCAACCTT CCGGTCATGG ATATGGCCAC GAGAAAGGTC
GAGATCACCG CCCAGAACCA CGGCTTCTCC GTCGATATCC TGTCGCTTAG CAACGTCGCC
GGCTTGGCGC ACGAGAACCT GAACGACCAG ACCGTCGAAG GTATGGCGCA CAAGACCCTC
CCCATCTTCT CGGTGCAGCA CCACCCCGAG GCGTCCCCCG GGCCGCACGA CTCGCACTAC
CTGTTCGACA GGTTCGTCGA GATGATGGAG AAGCATAAGG CGTAG
 
Protein sequence
MKAVLALADG RIFKGKAFGA TGETSGEVVF NTAMSGYQEV LTDPSYKGQM VTMTYTQIGN 
TGINPEDVES GQLYLSGFIV REYLDCYSNY RATMSLDAYL KENGIVGIQG IDTRALTRHL
RDKGAQNGII STIDFDPESL ARKARAIPSM SGLDLATGVT CSAPYHWTEG LWDLKSGYPQ
VDRKDLKYKV VAYDFGIKLN ILRCLVSAGC DVTVVPATFP AESALAMNPD GIFLSNGPGD
PEPMKEVIEN IKKFVGKKPI FGICLGHQLM GLALGGRTIK LKFGNHGSNL PVMDMATRKV
EITAQNHGFS VDILSLSNVA GLAHENLNDQ TVEGMAHKTL PIFSVQHHPE ASPGPHDSHY
LFDRFVEMME KHKA