Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1898 |
Symbol | |
ID | 6781888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2197742 |
End bp | 2198866 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642767890 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_002138708 |
Protein GI | 197118281 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAG TACTTGCTCT GGCGGACGGC CGGATTTTCA AGGGTAAGGC CTTCGGTGCG ACGGGCGAAA CAAGCGGCGA GGTGGTGTTC AATACCGCCA TGTCCGGCTA TCAGGAAGTC CTCACCGACC CTTCCTACAA GGGGCAGATG GTCACCATGA CCTACACCCA GATCGGCAAC ACCGGCATCA ACCCGGAAGA TGTGGAAAGC GGGCAGCTCT ACCTGTCCGG CTTCATCGTC AGGGAGTACC TGGACTGCTA TTCCAACTAC CGCGCCACCA TGAGCCTGGA CGCTTACCTC AAGGAGAACG GCATCGTCGG CATCCAGGGG ATCGACACCC GCGCCCTGAC CCGCCACCTG CGCGACAAGG GGGCCCAAAA CGGCATCATC TCCACCATCG ACTTCGATCC GGAGAGCCTG GCCAGGAAGG CGCGCGCCAT CCCCTCCATG AGCGGTCTGG ACCTTGCCAC CGGCGTCACC TGCAGCGCCC CGTACCACTG GACCGAAGGT CTGTGGGACC TGAAGAGCGG CTACCCGCAG GTCGACCGCA AGGATTTGAA GTACAAGGTC GTGGCCTACG ACTTCGGCAT CAAGCTGAAC ATCCTGCGCT GCCTGGTTTC CGCCGGTTGC GACGTCACCG TGGTTCCGGC GACCTTCCCT GCGGAGTCCG CGCTCGCCAT GAATCCGGAC GGCATCTTCC TTTCCAACGG CCCGGGCGAC CCTGAGCCGA TGAAGGAAGT CATCGAGAAC ATCAAGAAAT TCGTCGGCAA GAAGCCGATC TTCGGCATCT GCCTTGGACA CCAGCTCATG GGCCTTGCCC TGGGCGGCCG CACCATCAAG CTCAAGTTCG GCAACCACGG CTCCAACCTT CCGGTCATGG ATATGGCCAC GAGAAAGGTC GAGATCACCG CCCAGAACCA CGGCTTCTCC GTCGATATCC TGTCGCTTAG CAACGTCGCC GGCTTGGCGC ACGAGAACCT GAACGACCAG ACCGTCGAAG GTATGGCGCA CAAGACCCTC CCCATCTTCT CGGTGCAGCA CCACCCCGAG GCGTCCCCCG GGCCGCACGA CTCGCACTAC CTGTTCGACA GGTTCGTCGA GATGATGGAG AAGCATAAGG CGTAG
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Protein sequence | MKAVLALADG RIFKGKAFGA TGETSGEVVF NTAMSGYQEV LTDPSYKGQM VTMTYTQIGN TGINPEDVES GQLYLSGFIV REYLDCYSNY RATMSLDAYL KENGIVGIQG IDTRALTRHL RDKGAQNGII STIDFDPESL ARKARAIPSM SGLDLATGVT CSAPYHWTEG LWDLKSGYPQ VDRKDLKYKV VAYDFGIKLN ILRCLVSAGC DVTVVPATFP AESALAMNPD GIFLSNGPGD PEPMKEVIEN IKKFVGKKPI FGICLGHQLM GLALGGRTIK LKFGNHGSNL PVMDMATRKV EITAQNHGFS VDILSLSNVA GLAHENLNDQ TVEGMAHKTL PIFSVQHHPE ASPGPHDSHY LFDRFVEMME KHKA
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