Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1882 |
Symbol | |
ID | 6781872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2179652 |
End bp | 2180329 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642767874 |
Product | signal peptidase I |
Protein accession | YP_002138692 |
Protein GI | 197118265 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATT ACAAAAACGT CTGCGAAGAC AACAAGCCTG CGCAGTCTCC GGTCCAGCCG GACCAGCCGG TCAAGGCGAA GCATGTGGTT CGCGAATACG CAGAGTCGAT CATCATAGCG ATCCTTTTGG CGCTCGTGAT CCGTACCTTC ATAGTGCAGG CCTTCAAGAT CCCGTCCGGG TCCATGGAGG ATACGCTTGC CATCGGCGAC CACCTGCTGG TCAACAAGTT CATCTATGGC TCGAAGATCC CCTTCACCGG CAACCGCGTC CTCACCATCA GGGACCCGCG CCAGGGCGAC GTGGTCGTCT TCGAGTACCC GGAAGACCCG TCCAAGGACT TCATCAAGCG CGTGGTAGGC GTCCCCGGCG ACGTGGTCGA GGTAAAGAAC AAGCGGGTGT ACGTGAACGG GAAACTCTAC GCGAACCCGC ACGAGGTGCA CAAGGAGTCC GACACCATCC CGAAGGAGAT GAACCCCAGG GACAACAAGG ATCCCATCAC CGTCCCGGCC AACTCCTACT TCGTCATGGG CGACAACAGG GACCGCTCCT ACGACAGCCG CTTCTGGGGG TTCGTGACCC GCGACAAGCT CAAAGGGCTC GCCTTCATCA AGTACTGGTC CTGGGACAAA GACAAGCTCA GGGTCCGCTT CGGGAGCATC GGCAAGCTGA TCGACTAG
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Protein sequence | MEDYKNVCED NKPAQSPVQP DQPVKAKHVV REYAESIIIA ILLALVIRTF IVQAFKIPSG SMEDTLAIGD HLLVNKFIYG SKIPFTGNRV LTIRDPRQGD VVVFEYPEDP SKDFIKRVVG VPGDVVEVKN KRVYVNGKLY ANPHEVHKES DTIPKEMNPR DNKDPITVPA NSYFVMGDNR DRSYDSRFWG FVTRDKLKGL AFIKYWSWDK DKLRVRFGSI GKLID
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