| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1778 |
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| Symbol | |
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| ID | 6781767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2051103 |
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| End bp | 2052992 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642767771 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_002138590 |
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| Protein GI | 197118163 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGCA TAGCCGGCTT CTTCAGAACC CTCTGTCCGG AGGGGGACAC GCGCCTTTTG
CGGCGGATGG GGGAGGTGAT CAGCCACCGC GGTCCCGACG CCTCCGGCGA ATTCCTCGAT
GAAGAGGTGG GGCTTTCCCA CAGAAGGCTA AGCATCCTGG ACCTTTCCCC CCTGGGGAAC
CAGCCGATGC ACTCCCTGGA CGGAAGGTAC GTCATCGTCT TCAACGGCGA GATCTACAAC
TTCCTGGAAT TGCGCGGGGA ACTGGAGCGC GAAGGGGTCT CGTTCAGGAG CAGGACCGAT
ACCGAGGTGA TACTTGCCCT CTACGCCAGG GAAGGGGTGG CGTGCTTGAA GCGCCTGAAC
GGCATGTTCG CTTTCGCCCT TTGGGACCGG GACACAAAGA CGCTCCTTTT GGCTCGGGAC
CGGATCGGCA AGAAGCCTTT GTACTACTAC CATGCCGGCG GGGATCGGAT CGCCTTCGCC
TCGGAGATAA AGTCGCTCCT CGAGGTCCCG GGGGTGGAGC GGCAGGTTGA GCCGACGGCG
GTGGCGGACT ACCTGAAGTA CCTCTACATC CCGGCTCCGA AGACCATCTA CCGGCGTCTC
TACAAGCTCC CCCCCGCCCA CTGCCTGGAA CTCAAGGCGG GAGAAGAGCC ACGGATCCGC
GAGTATTGGG ATGTGGAGTT CAAGGCCGAC TACGGGCTGA CCCCCGAGGC GGCGGAAGAA
GAGCTTTTGG ACCTGCTGCA AAAGGCGACC GCCTGCCGCA TGATCGCCGA CGTGCCGCTG
GGGGCCTTTC TTTCCGGCGG GGTCGACTCC AGCGCCGTGG TGGCGCTCAT GGCGCGCGCG
GCGCAGGAGC CGGTGAAAAC CTGCTCCATA GGCTTCGACG ACAAGCGCCA CGACGAGACC
CCCTACGCCC GCGAGGTGGC ACGGCTTTTT GCAACCGAGC ACAAGGAGTA CCGGGTCAGC
GCCGACCTGG CCGGGACGGT GGCCCTCTTG CCTCGCTTCT TCGATGAGCC GTTCGCCGAC
TCTTCGGCGC TTCCCACCTA CCACGTCTCG CGCCTGGCGC GGCAGTCGGT GACGGTGGCG
CTCGCTGGAG ACGGCGGCGA CGAGAGCTTC GCTGGGTACC AGAAGTACGC CATCGAGCTG
AAGGAGGATC TGGCGCGGCG CGCGGTCCCC AGGGCGCTTC TTTCCCTGAT CGGCAAGGCG
GCAGGCGCCG CGTCGCACCC GCTTTTGAGA AAGGTGCGCT CCCTCACCAC GAGCGCCCTT
ATGGAGCCGG CCGCAGCCTA CTACCGGACC AACACCTTCG TGGAGGACGA CCTTCTGGCG
GAACTTTTGT CGGAGCCTTT CCGGCGGGCC TGCGCCGGTT ACGACCCCGC CGAGCAGACC
ACGCGCTACT TCAGCCGGAT GCAGGGGGCG GATCACGTGA CCGCCATGCT CTACACCGAC
CTGAAGAGCT ACCTCCCGGG GGACATCCTG GTCAAGGTGG ACCGGATGAG CATGGCGCAC
TCGCTCGAGG TGAGGGCCCC CTTTCTGGAC TACCGGATCG TCGAGTTCGC CGCGAGGCTT
CCCTCCAGCT GGAAGATCTC CGGCGGCGAG AAGAAGATCA TCCTCAGGAA GGCCTTCGGG
CGCCTGCTCC CGGACAGCGT GCTGAACCGC CCCAAGCAGG GGTTCACCGT GCCGCTGGAC
ACCTGGTTCA AAAAGGAGCT CAGGGAATTC GCCGGCAGCC GGCTTTTGGA CGACCCGACG
CTGTCGCAGT ACCTCTCCCT GAACGTGGTG AGGCGGGTCT GGGAGGAGCA CCAGCAGGAC
AGGGCCCGGC ACGGCACGCT CCTTTGGAGC CTGTTGATGC TGGCGCTCTG GCACCAGGAG
TACCAGGGAG GCGCACCATG TTCGAAGTGA
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| Protein sequence | MCGIAGFFRT LCPEGDTRLL RRMGEVISHR GPDASGEFLD EEVGLSHRRL SILDLSPLGN
QPMHSLDGRY VIVFNGEIYN FLELRGELER EGVSFRSRTD TEVILALYAR EGVACLKRLN
GMFAFALWDR DTKTLLLARD RIGKKPLYYY HAGGDRIAFA SEIKSLLEVP GVERQVEPTA
VADYLKYLYI PAPKTIYRRL YKLPPAHCLE LKAGEEPRIR EYWDVEFKAD YGLTPEAAEE
ELLDLLQKAT ACRMIADVPL GAFLSGGVDS SAVVALMARA AQEPVKTCSI GFDDKRHDET
PYAREVARLF ATEHKEYRVS ADLAGTVALL PRFFDEPFAD SSALPTYHVS RLARQSVTVA
LAGDGGDESF AGYQKYAIEL KEDLARRAVP RALLSLIGKA AGAASHPLLR KVRSLTTSAL
MEPAAAYYRT NTFVEDDLLA ELLSEPFRRA CAGYDPAEQT TRYFSRMQGA DHVTAMLYTD
LKSYLPGDIL VKVDRMSMAH SLEVRAPFLD YRIVEFAARL PSSWKISGGE KKIILRKAFG
RLLPDSVLNR PKQGFTVPLD TWFKKELREF AGSRLLDDPT LSQYLSLNVV RRVWEEHQQD
RARHGTLLWS LLMLALWHQE YQGGAPCSK
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