Gene Gbem_1684 details

Gene Information

• Locus tag: Gbem_1684
• ID: 6781672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1948407
• End bp: 1950461
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642767677
• Product: NAD-dependent epimerase/dehydratase
• Protein accession: YP_002138497
• Protein GI: 197118070
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.155843
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGGG CGACCAGTGA AGCGGTACCG GAGCACTTCG GCATAGTGGA GTGGTTCCGG 
CCGGGCGAGC GGGAACGGGT GGAACGGGTC CTTTCCGACA TGAAGGCGAT CGGCGCCAAG 
AGCCTCAGGA CCGGGATCTC CTGGGCGGAC TGGTACACGA GCGAGGGGAA GAGGTGGTAC 
GACTGGCTCA TCCCGCGGCT GGCGCGGGAG GTGGAGCTGC TCCCTTGCGT GCTTTACACC 
CCCCCCTCCA TCGGGATCGA GGCGAAGACC TCATCCCCCC CGCGTCGTCC CAAGGATTAC 
GCCGACTTCA TCGACCTTTT CGTCACCGCC TTCGGGGAGC ATTTCGAGTA CCTGGAGCTC 
TGGAACGAGC CTAACAACCT GAGCGAGTGG GACTGGACCC TGGACCCGCA CTGGACCTCC 
TTCGGGGAGA TGATCGGCGG GGCGGCCTAC TGGGTCAGAA AGCGCGGCAA GAAGACCGTC 
CTCGGGGGGA TGAGCCCCAT CGACGGCCAC TGGCTCTGCC GGATGTTCGA GCTGGGGGTG 
ATGGATTACA TCGACGTGGT GGGAATCCAC GGTTTCCCGG ACATCTTCGA TTACACCTGG 
AAGGGGTGGC AGCGCAACAT CGCCATGGTG CGGGAGATCC TCGACGAGAA GGAGTGCGCC 
TGCGAGATCT GGGTCACCGA GGCGGGCTTC TCCACCTGGC AGCACGACGA GTTCAAGCAG 
GCCAAGGTCT TCCTCGATTT TCTCGCCGCC CCGGCGCAGC GCGTCTACTG GTACGGCGTG 
GACGATCTCG ATCCCTCGCT TTCCGCGGTG GACCGCTACC ATCTGGACGA GCGCGAGTAC 
TTTTTCGGCT TGAGGAAGGC GGACGCAACG CCCAAGCTCC TCTACCGCCT GCTCCAGGAG 
GGGACGCTTT CCTCCCTGAA GCGCGTGGTA GCCGCTGGGA GCGCCGCGAG GGCAGACAGC 
GGCGGGACCG AAAAGGCGGT GCTCGTCACC GGGGGGGCCG GGTTCATCGG GACCAACCTG 
GTGCAGCACC TGGTGGCGCA GGGGGAGAGG GTGATCCTCT ACGACAACCT CTCCCGCGCA 
GGGGTCGAGA AGAATCTCCT CTGGCTCATG GACAACTGCG GCGAAAGGCT GCAGGTGGTG 
ATAGGGGACA CCCGCAACTC TCTCCTTCTG GAGCAGGCGG TAAGTGAGGC GAAACAGGTC 
TTCCACTTCG CGGCCCAGGT AGCGGTCTCC AGCAGTATCG ACAACCCCGC CAACGACTTC 
GCCATCAACG TCCAGGGGAC CTTCTCGCTC CTGGAGGCGA TCCGCAAGGC GAAGACCCCT 
CCTTCGCTTC TCTACACCTC CACCAACAAG GTGTACGGGG CCATCGAGGG GTGCGGCGTC 
CGGAAAAACG GGGTGCGCTA CGAGCCGCTC GACCCGCAGC TCCGCTCCCA CGGGCTGGGA 
GAAGGGACCA CGCTCGATTT CCTGAGCCCC TACGGCTGCT CCAAGGGATG CGCCGACCAA 
TATGTCCTGG ACTACGCCCG CAGCTTCGGC ATCGACGCCG CGGTCTTCCG GATGAGCTGC 
ATCTACGGCC CGCACCAGTA CGGCACCGAG GAACAGGGGT GGGTGGCGCA CTTCGCCATA 
CAGACCATGA AAGGGGAGCC CATCACCCTC TACGGGGACG GCTGCCAAAT CCGGGATCTC 
CTCTTCGTCG AGGACCTGGT GGACGCCATG TGCCGGGCGC GGGACATCAT GCCGCGCATA 
GCCGGCCAGG CCTTCAACAT CGGCGGCGGC CCCGCTCGCA CCATAAGCCT CTTGGAGCTT 
TTGGATCTGT TGCGCGATCT GCACGGCACC CTTCCCACCA TACTGCGCGA CGACTGGCGC 
ACCGGGGACC AGAGGTACTA CGTCTCCGAC ACCAGGAAGT TCTGCAAGGC TACCGGATGG 
ACGCCGCGGC ATTCGGTGGC CGAGGGGGTG CGCAGGCTGT ACGACTGGCT CCTGGAAACG 
ATGCACTCGC CGGCGCGCGG CGCCGGGAGC TTCGACAAGC AAAGCTACCC GGCGACGGGG 
GCGGAGGCGA TCTGA 

 

Protein sequence

MKRATSEAVP EHFGIVEWFR PGERERVERV LSDMKAIGAK SLRTGISWAD WYTSEGKRWY 
DWLIPRLARE VELLPCVLYT PPSIGIEAKT SSPPRRPKDY ADFIDLFVTA FGEHFEYLEL 
WNEPNNLSEW DWTLDPHWTS FGEMIGGAAY WVRKRGKKTV LGGMSPIDGH WLCRMFELGV 
MDYIDVVGIH GFPDIFDYTW KGWQRNIAMV REILDEKECA CEIWVTEAGF STWQHDEFKQ 
AKVFLDFLAA PAQRVYWYGV DDLDPSLSAV DRYHLDEREY FFGLRKADAT PKLLYRLLQE 
GTLSSLKRVV AAGSAARADS GGTEKAVLVT GGAGFIGTNL VQHLVAQGER VILYDNLSRA 
GVEKNLLWLM DNCGERLQVV IGDTRNSLLL EQAVSEAKQV FHFAAQVAVS SSIDNPANDF 
AINVQGTFSL LEAIRKAKTP PSLLYTSTNK VYGAIEGCGV RKNGVRYEPL DPQLRSHGLG 
EGTTLDFLSP YGCSKGCADQ YVLDYARSFG IDAAVFRMSC IYGPHQYGTE EQGWVAHFAI 
QTMKGEPITL YGDGCQIRDL LFVEDLVDAM CRARDIMPRI AGQAFNIGGG PARTISLLEL 
LDLLRDLHGT LPTILRDDWR TGDQRYYVSD TRKFCKATGW TPRHSVAEGV RRLYDWLLET 
MHSPARGAGS FDKQSYPATG AEAI