| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1615 |
|---|
| Symbol | |
|---|
| ID | 6781603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1873762 |
|---|
| End bp | 1875624 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642767609 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_002138429 |
|---|
| Protein GI | 197118002 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCA TCTTTGGAGC ACTATCGCCG CAGTCCGCCC CGGTGGAGCA ACTGTACGAG
AAGATTGCCA GCCTCGCCCA CCGCGGTCCC GATGACTCAG GATGCTGGGT CTCACCGGAC
CGGACCGTCG TCCTCGGCCA CCGTCGGCTC TCTATCCTGG ACTTGTCTCA AGCTGGACAC
CAGCCCATGG CCAGTTCGTG CGGCCGCTAC CACATAGTCT TTAACGGTGA GATCTACAAC
TACCTTGAGA TCAGGGACGA ACTGGCCGCA CTGGGATTCC TTTTTTCTGG CAGCGGCGAT
ACCGAGGTCG TCCTCGCCTC CTACCGCCAG TGGGGCGCGG ACTGTCTGGG GCGCTTTAAT
GGCATGTTCG CTCTGGCCAT TTGGGATGAG GGAGATGTCG CCAACCAGCC CCGTCTGTTC
ATGGCGCGAG ACCGGGCGGG GAAGAAGCCG TTTTATTACG TCCACGATGG GCGTTCGTTA
CGCTTCGCTT CCGAATTGAA GGCGCTTGGC CCGGGAAAGA GTGTCGACCT GCGCGCGCTG
AATTTCTACC TCGCCTTGGG CTACGTACCC GACACGCTCT GCATCGCTGC CGGGGCTAAA
AAGCTTCCCC CCGCCCATGC CGGCTACTTC CTCCCCGAAA GCGGGGAGCT TGAGACCTGG
CGCTATTGGA GCCTGCCCCA GAACCTCCCT GACCCGGGCC GCGGGTGCGA AGATCTCGCG
GACGAGGCGG AGAGCCTGCT GCGGGATTCG GTTGCCATGC GTCTGCGCAG CGACGTGCCC
GTGGGGGTGT TGCTATCGGG GGGGTTAGAC TCGAGTCTGG TGGTGGCAGC CGCCGCTCAG
GCCTCGACCA CGCCGATCAA GACCTTCACC GTTTCGTTCC CCGGCACCCG CTACGACGAG
GCAGGATACG CCGCCATCGT GGCGCGCCAC TTCGGGACCG AGCACCACGT GCTGGAGGTC
CCCCAGCCAT CGTTGGGGAC CCTAGACGCT TTCTCTCCCT TAATAGACGA GCCACTTGCC
GACTCTTCGC TTCTGCCTGC TTTCATGGTC TCCCGGTTAA CCGTGCAGCA CGTAAAGGTG
GCGCTTGGTG GCGACGGCGG CGACGAACTT TTCGGCGGCT ACGCCGACTA CACCATGGCA
GCTGCGGACC AGCGCTGTCT GGGCTGGATA CCGAAGCCGC TGCTGTTGGC GGCGGGCCGT
GCGGCGGGAG CACTGCCCGC CGGGGTCAAG GGGCGCAACC GCCTCTTTGC CCTGCAGGGT
GGGGCGTACG AGTCCATGAT ATGGGGAAGC CCTTATTTCG ACCTCTCGCT GCGCCGTCGC
ATCTTGGCCT CGGAGCAGGT TCAGGCCCTT GGTGAACAGT TGGATGAGCC GGAGCGTTGG
CTGATGTCGC TGTTCCGGAC CGGCCGCGAC CCTCTTGACT GCATGACCAG AACCCATTTC
GGAGGCATTT TGCCGGACGA CTTCCTGGTG AAGGTGGATC GAGCGAGCAT GGCGGTGAGC
CTAGAGCTTC GCGCCCCGCT CCTTGACTAC CGGCTGGTCG AGTTCGCCTT CGGCAGGTTG
CCTTCCCATT GGAAGGTACA GGGGCAGGAA AGTCGCCGGC TCCAGAAGGT GCTAGGCCGT
CGCATGCTCC CCCCCCAGCT CGACATCAAC AGAAAACAGG GATTCTCCAT ACCTTTGGAC
AGCTGGCTGC GCAGTTCCCG GGGGGGCGAG GTCGAGGAAA TGCGCCGCTG GTTACCGGAC
TGCATCGTAC AGGACGAGGT TGCGAGGCTC ATCGCCGGGC ATCTGAAAGG GCGTGCTAAC
GGCTCGCGCC TCTTCGCATT GATGATGCTT GCCTTGTCAC AAAAAAATAG CCAGGAGAAT
TAG
|
|---|
| Protein sequence | MCGIFGALSP QSAPVEQLYE KIASLAHRGP DDSGCWVSPD RTVVLGHRRL SILDLSQAGH
QPMASSCGRY HIVFNGEIYN YLEIRDELAA LGFLFSGSGD TEVVLASYRQ WGADCLGRFN
GMFALAIWDE GDVANQPRLF MARDRAGKKP FYYVHDGRSL RFASELKALG PGKSVDLRAL
NFYLALGYVP DTLCIAAGAK KLPPAHAGYF LPESGELETW RYWSLPQNLP DPGRGCEDLA
DEAESLLRDS VAMRLRSDVP VGVLLSGGLD SSLVVAAAAQ ASTTPIKTFT VSFPGTRYDE
AGYAAIVARH FGTEHHVLEV PQPSLGTLDA FSPLIDEPLA DSSLLPAFMV SRLTVQHVKV
ALGGDGGDEL FGGYADYTMA AADQRCLGWI PKPLLLAAGR AAGALPAGVK GRNRLFALQG
GAYESMIWGS PYFDLSLRRR ILASEQVQAL GEQLDEPERW LMSLFRTGRD PLDCMTRTHF
GGILPDDFLV KVDRASMAVS LELRAPLLDY RLVEFAFGRL PSHWKVQGQE SRRLQKVLGR
RMLPPQLDIN RKQGFSIPLD SWLRSSRGGE VEEMRRWLPD CIVQDEVARL IAGHLKGRAN
GSRLFALMML ALSQKNSQEN
|
|---|
| |