| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1567 |
|---|
| Symbol | |
|---|
| ID | 6781555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1814665 |
|---|
| End bp | 1816089 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642767561 |
|---|
| Product | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I |
|---|
| Protein accession | YP_002138381 |
|---|
| Protein GI | 197117954 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000749576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTA TCACTTTCGG CACCTCTGGC TGGCGCGGCA TCATGTGTGA AGATTTCATC
TTTGAGAATG TGAAGGTAGT CACTCAGGCC ATTGCGGACA ACGTCAAGGC CTCCGGCGAG
GCGCGCAAGG GAATCATCGT AGGGTACGAC TCCCGTTTCA TGGGCGAATC CTTCGCCCGT
GAGGCCGCCC GCGTGCTGAC TGGAGCCGGC ATCACCACCT ATCTTTGCAT CCGCGACACC
CCCACCCCTG TAATCGCTTT CGAGATCCTC AGGCGCGGCA CGGCAGGCGC CATCAACTTC
ACCGCCAGCC ACAATCCCCC CGAATATAAC GGCATCAAGT TTTCCCCCTC CTGGGGGGGA
CCTGCCCTGC CGCAGACCAC CACCGACATC GAAAACCGCG CCAACGAGAT GGCGGGAGAG
ATCTGCTACA CGGAGTGCTC CATCGACGAG GCGATGCAGA AGGGGCTCCT GGTGGAGATC
GACCCGATGC AGGCTTACCT GGAGGATCTG GCAACCAAGG TCGATTTCGC CGCCATCGCC
AAGTTGGGGA CCATCGCCGT AAATCCTCTC TACGGCACCG CCCGCGGCTA CCTCGCCGAA
CCGCTCAAGG CCCACGGCGT CAAAGTGGTG CAGATGAACG CCAATCGAGA CCCCTACTTC
GGCGGATTCC CCCCCGAACC GTCCGAGAAA TACATCCAGG ACTTCATCCG GCTGGTGCAG
CAGGACCCTT CCATCAGCCT GGGGATCGCC ACCGACGGCG ACGCGGACCG CTTCGGCATC
GTGGATAGCG ACGGCAGCTT CATTGAGCCC AACTACATCA TCGCGCTGCT CCTCGATTAC
CTGGTCCGGG TGAAGGGGAT GACCGGCGGG GTAGGGCGCT CCGTCGCCAC CTCGCATCTG
GTGGACGCGG TGGCCAAGCT GCACGGGATC GAGGTCTTCG AGACGCCCGT AGGCTTCAAG
TTCATCGGCG AGCTGATCAG CCAGGACAAG ATCATCATCG GCGGCGAAGA GAGCGCCGGG
CTCACCATCA AGGGGCACGT CCCCGAAAAG GACGGCATCC TGGCCTGCCT GCTGGTGGCC
GAGATGGTCG CGCGCGAAGG CAAGCCGGTG AGGGCTCTGC TGGAGCAGCT CTACGAGAAG
GTGGGGCGCT ATCTCACCAA GCGCGTCAAC ATCACGCTGT CGCCGGAACT GGAAGAAGTC
TTCCCGGAAC GCATCGCGGC CACCCCCGCA GGCTTCGCAG GAGTATCGGT AAAGCAGAAG
GTGACGGTGG ACGGCAACAA GTTCATCCTG GAGGACGGGA GCTGGCTCCT GTTCAGGAAG
TCTGGGACCG AACCGGTGGT GCGGCTTTAC GCCGAGGCCT CCAACGAGGC GCGCCTGCAG
GCGCTTTTGG AAGCCGGCCG CGAATTCATC GTGGGCAAAG CGTAA
|
|---|
| Protein sequence | MQRITFGTSG WRGIMCEDFI FENVKVVTQA IADNVKASGE ARKGIIVGYD SRFMGESFAR
EAARVLTGAG ITTYLCIRDT PTPVIAFEIL RRGTAGAINF TASHNPPEYN GIKFSPSWGG
PALPQTTTDI ENRANEMAGE ICYTECSIDE AMQKGLLVEI DPMQAYLEDL ATKVDFAAIA
KLGTIAVNPL YGTARGYLAE PLKAHGVKVV QMNANRDPYF GGFPPEPSEK YIQDFIRLVQ
QDPSISLGIA TDGDADRFGI VDSDGSFIEP NYIIALLLDY LVRVKGMTGG VGRSVATSHL
VDAVAKLHGI EVFETPVGFK FIGELISQDK IIIGGEESAG LTIKGHVPEK DGILACLLVA
EMVAREGKPV RALLEQLYEK VGRYLTKRVN ITLSPELEEV FPERIAATPA GFAGVSVKQK
VTVDGNKFIL EDGSWLLFRK SGTEPVVRLY AEASNEARLQ ALLEAGREFI VGKA
|
|---|
| |