Gene Gbem_1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1471 
Symbol 
ID6781458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp1703622 
End bp1704692 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content62% 
IMG OID642767464 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_002138285 
Protein GI197117858 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTCG CCAGCATAGC CGAGGCAATC GAGGACATCC GGGCCGGTAA GATGGTCATT 
CTTGTCGATG ACGAGGATCG CGAGAACGAA GGCGATCTCA CCATCGCCGC CCAGTGTGTA 
ACCCCTGAGA TAATCAACTT CATGGCCATG CACGGGCGCG GGCTGATCTG CTTGACCATG 
ACCGGAGAGC GCTGCGACAG GCTGGCGCTC CCCTCAATGG TGCGCGACAA CACCTCCTCC 
TTCGGCACCG CCTTCACCGT CTCCATCGAG GCGCGCCGCG GAGTCACCAC TGGCATCTCC 
GCCGCCGACC GCGCCCACAC CATTCTCACC GCCGTAGCCC CCGATGCCTG TGCCGAGGAC 
CTGGCGCGGC CGGGACACAT ATTCCCGCTG CGCGCAAGAG AAGGAGGCGT CCTGGTCCGC 
TCCGGTCAGA CCGAGGGCTC CGTCGACCTG GCGCGCCTGG CAGGGTTAGA GCCTGCCGGC 
GTCATCTGCG AGATCATGAA CGATGACGGC ACCATGTCCC GCATGCCCGA TCTGAAGAAG 
TTCGCCCTGC GTCACAGGAT CAAGATCTGC ACCATAGCCG ACCTCGTCGC CTACCGGATG 
CAGCACGAGT CATTGGTCCG CCGCTGCGTC GAGGTCAAAC TCCCCACCCA GTTCGGCGAC 
TTCCGCGCCG TAGGCTTTGA AAACGACGTC GACGGCCTGG AGCACATAGC CTTGGTCAAA 
GGCGACATAG GTGGAGACGA ACCGGTCCTG GTGCGGGTCC ACTCAGAGTG TCTGACCGGC 
GACGTCTTCG GCAGTGTCAG GTGCGACTGT GCTGACCAAC TGCACCTGGC CATGCAGCAA 
GTACAAGCCG AGGGGAGGGG GGTAATCCTC TACATGCGGC AGGAGGGGCG CGGCATCGGC 
CTGACCAACA AGTTGAAGGC TTATGCGCTG CAGGATCAAG GCAAGGACAC CGTCGAAGCA 
AACTTCGCCC TGGGGTTCAA GGCCGACATG CGGGATTACG GCATAGGCGC GCAGATCCTC 
TCAAATCTAG GTATAAAGAA GATCCGGCTC ATGACCAACA ACCCGAAGTA G
 
Protein sequence
MSVASIAEAI EDIRAGKMVI LVDDEDRENE GDLTIAAQCV TPEIINFMAM HGRGLICLTM 
TGERCDRLAL PSMVRDNTSS FGTAFTVSIE ARRGVTTGIS AADRAHTILT AVAPDACAED 
LARPGHIFPL RAREGGVLVR SGQTEGSVDL ARLAGLEPAG VICEIMNDDG TMSRMPDLKK 
FALRHRIKIC TIADLVAYRM QHESLVRRCV EVKLPTQFGD FRAVGFENDV DGLEHIALVK 
GDIGGDEPVL VRVHSECLTG DVFGSVRCDC ADQLHLAMQQ VQAEGRGVIL YMRQEGRGIG 
LTNKLKAYAL QDQGKDTVEA NFALGFKADM RDYGIGAQIL SNLGIKKIRL MTNNPK