| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1438 |
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| Symbol | |
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| ID | 6781425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1660552 |
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| End bp | 1662330 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767431 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002138252 |
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| Protein GI | 197117825 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCAGG TCGCTGACAT AACGGGGATG GAAGGGACTA CCGGCTGCGG TGACGCTTCG
GGCATCGTGA GGCTGGACGC CGATCTCGGC ATCACCTACC TCGACGCGGC CGCCGCTGAC
CTGATAGGGA TCCCCGCGGA GAGCCTTTTG GGGTGCGGGC TCGACGAGGT GGCGGATCTC
TCCGAGCTCA GCACCCTGAT GAGAAGCGGC ACCGTCTTCA ACAATCAGGT GCTGCAGGTC
GGCAAGAGGC GTCTGGTCTG CGACTTTCTC CCGACCATGG AGTCGGAGCA GCTGGTGGGG
GGGATTTTGT CCGTCCTGCG GCTCCTTCCG GAACAACTCC CCGATCCCTC CATCGATTTG
AGAGCCCTGT TGCAGTCGGG TAGCGCCTCC CTCGATCTCA ACTACGACGG CATCGTCATC
GTGGACCGGG AAGGGGTGGT GGTCATGGTC AACCAGGCCT TCGCCGACAT CCTCGACACC
ACCCCCAACG CCATCATCGG CAAGCACGTC AGCGATGCCT ACCCCAATTC CCAGTCCTCG
AAGCTGCCGG CGGTCATGGA AACCGCCACC CCCCAGATCG GCATCACCCA TTACCTGAAC
GGCAAGCAGG TCTACGCCTC GCTCTATCCG ATCGTCAAGG ACGGCCAGGT GATCGGCGGG
GTCGGCAAAA TCCTGTTCAA GGACATCCGC GAGATCACGC TGATCGCCAA CCGGCTGCAG
GGCGCCTCCG AGACGCGCGC GGCGGCCGGG AACGTGGCGC GCAAGGAATC GATGTCGCGC
TACGACGTGA ACAGCATCGT CGGGCAGAGC AAGCAGATGC AGGACCTGAA AGAGTCCCTG
CTGCGGGTGG CTTCCAAGAA CTCGAACATC CTCCTCCTGG GGGAGAGCGG GACCGGGAAA
GAGCTTTTCG CCCACGCCAT CCACGCCGCC AGCAACCGCC GCTACGCCCA GTTCGTCAAG
GTCAACTGCG CCGCCATTCC GGAACATCTG CTGGAAAGCG AGCTCTTCGG CTATGCCGAG
GGAGCCTTCA CTGGGGCGAG GAAAGGGGGG CAGCTGGGGA AATTCGAGCA GGCGCACCTG
GGGACCATCT TCCTGGACGA GATCGGCGAC ATGCCGCTGT ACATGCAGGC GAAGATGCTG
CGGGTCCTGC AGGAGAGGGA GCTGACACCT TTGGGGAGCA ACGCGCCGAA AACGGTCGAC
GTGAGGGTGG TCGCCGCCAC CAACAGCAAC CTCGAGGCCT TGGTGCGGGA GGGGAAGTTC
CGGCAGGACC TCTACTATCG CCTCAAGGTG GTGACGCTCT GCATCCCCGC GCTCAGGGAG
CGCAAGGAGG ACATCCGCGC CCTCAGCATA AATTTCATCC AGCAGTTCAA CGAGGAGTTC
GGGCTGGAGG TCCAGGCGCT GAGCCTGGAG GCCCGCGACG TGGTCATGCA CTACGACTGG
CCGGGGAACG TGAGGGAGCT GCGCAACGTG ATCGAGAGCG CCTTCAACGT GGTGACCGGT
CCGCTCATCC TCAAGGAGCA CCTCCCGGAA CAGCTCTCCA GGATGATCCA GGACGGCAGC
TCCGGCATCC CGCACGACAT CGGCCCCTAC CTGCGCGCAA GGCTCGGGAG CAAGCCGCTT
CCGGCCATCG TCGAGGAGTT CGAGAAGCTG CTGGTCGAGG CCGCCATCGA GTTTTGCAAC
GGCAACAAGC TGCAGGCCGC CGATCTGCTC GGCATCTCTC GGCAGTGGCT GTACAAGAAG
CTACAAAAGA AGCATAACGA CGACTCTTCC GGCCACTGA
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| Protein sequence | MVQVADITGM EGTTGCGDAS GIVRLDADLG ITYLDAAAAD LIGIPAESLL GCGLDEVADL
SELSTLMRSG TVFNNQVLQV GKRRLVCDFL PTMESEQLVG GILSVLRLLP EQLPDPSIDL
RALLQSGSAS LDLNYDGIVI VDREGVVVMV NQAFADILDT TPNAIIGKHV SDAYPNSQSS
KLPAVMETAT PQIGITHYLN GKQVYASLYP IVKDGQVIGG VGKILFKDIR EITLIANRLQ
GASETRAAAG NVARKESMSR YDVNSIVGQS KQMQDLKESL LRVASKNSNI LLLGESGTGK
ELFAHAIHAA SNRRYAQFVK VNCAAIPEHL LESELFGYAE GAFTGARKGG QLGKFEQAHL
GTIFLDEIGD MPLYMQAKML RVLQERELTP LGSNAPKTVD VRVVAATNSN LEALVREGKF
RQDLYYRLKV VTLCIPALRE RKEDIRALSI NFIQQFNEEF GLEVQALSLE ARDVVMHYDW
PGNVRELRNV IESAFNVVTG PLILKEHLPE QLSRMIQDGS SGIPHDIGPY LRARLGSKPL
PAIVEEFEKL LVEAAIEFCN GNKLQAADLL GISRQWLYKK LQKKHNDDSS GH
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