Gene Gbem_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1424 
Symbol 
ID6781411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1641093 
End bp1643072 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content62% 
IMG OID642767418 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_002138239 
Protein GI197117812 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATC TGTTCCTTCC CTTGCTGATG GTACTGATCT TCGGCACCTC CGCGCTTGCA 
GCCGATGTGT CCGCCCAGGC GGCCCCAGGC GGCCCCAATG CCGTAGCAGC CGCCGCTGCC
AAGGCCCCGC CGGGGCTCGC CGCTTCCCCG CAAGCGCCCG CTGCAGCGGC GGCCAAGGCT
CAGGCACCGG CGCCGGCGCC GGGCGGCAAG AAGATGCAGA CCAACCGCAC GTTCACCATC
AGCATGTTCC TCTTGATCAT CGCGGCGACC GCCGGGATCG TGGTCTGGGC CTCGAAAAGC
ACCACCACCG CATCCGATTA TTACGCGGCG GGCGGTGGCA TTTCCGGGAT TCAGAACGGC
TGGGCCATCG CCGGAGATTT CCTCTCCGCC GCGACCTTCC TCGGGATCAC CGGACTCATG
TCTCTCTTCG GCCCGGACGG GTTCATGTAC TCGGTGGGGA TCATCATCAG CTTTCTCACC
ATCCTCCTCA TCATCGCCGA ACCATGCCGC AATGCCGGCA AGTACACCCT GGGCGACATC
CTCGCCTTCC GTTCGTCGTC CCGGGTAGTG CGGGCTGTCG CGGCCCTTTC CGCCGTGGTG
GTTTCCATCT TCTACCTGCT CGGGCAGATG GTGGGGGCCG GCAAACTGAT GCAGCTCCTT
TTGGGGATTC CCTACAAGGT CTCGATCATA GGAGTCGGTG CCCTGATCAT CGTCTACGTG
GCGCTGGGCG GGATGAAGGC GACCACCTGG GTGCAGATCA TCAAGGCCGC GCTCCTCATG
TTCACCGGGG TCGTCCTGAG CGTCGGGATA CTCTGGAAGT CGGGATTCAG CCTCTTCGCA
TTCTTCGACA GCGTGGCGAC CAGCCCGCAG ATCCAGGATC ACGTGCGTGG CGTCATGAAG
CACCCGGTGG CGCAGCCGGG GTTCGATTAC GGCCAGCGCT TCCTGGAGCT GGGGCTTTTC
TTCAAGAACC CGCTGGACCA GGTATCCCTC GGACTTGCGT GGATCCTCGG GGCCGCCGGC
CTGCCGCACG TCATGATGCG GTTTTTCACC GTGCCCAACG CCAAGGAGGC TAGAAAGAGC
GTGGTCGCCT CCATGTTCCT GATCGGCCTG TTCCTGATCA TGGTTTCCTT CCTGGGCTTT
GGCGCCGCCC TTTATGTCAC CCCGCAGAAG ATTATGGCGC TCGACAAGGG GGGCAACATG
GCGGGGCTCA TGATCGCGCA GTATATCGGC GGCGGGGCGG GTACCGTCAC CGGAGACCTG
CTCCTGGCCT TTGTCTGCGC CGTCGCTTTC GCCACCATAC TCGCGGTCGT CTCGGGTCTG
GTGCTCGCAT CCTCGGCGGC CATCGCCCAC GATTTGTACG TCAACGTCAT TAAAAAGGGG
AAGGCGGATC AGGGGACACA GATAAAGGTC GCCAGGGTGG CATCGTTTTT CGTCGGCGCC
ATCGCCATCG TGCTCGGCAT TGCCTGCGAA AACCTCAACA TCGCGCAGCT GGTCGGCCTT
GCGCTTGCCG TGGTGGCTTC GGCGAACTTC CCCGTCCTGA TCTTCGCGCT GTTCTGGAAG
CGGTTCAATT CAGCCGGGAT CATCGCCGGC TTGGTGGTCG GCACCGTGGT GACCATCGGG
ATCCTGATGG TTTCGCCGAA CATGACCTAT CCCAAGAAGG TGGCTGCCGA CGCCCAGAAG
GTCGTGCTCG CCTTGGAGAA AAAGCAAAGC GAGGCTGGGG GGCTTTCCGC TGTGGAGTTG
AAAACGCTGG AAAAGGCGAA ATCGGATTAC GTGCTGAACA AGGAAGGGAC CTCGCTGGTG
GGGCTCGACG CGCCGCTATT CCCGCTCAAA AACCCGGGGA TACTTTCCGT GCCCATCGGG
TTCTTCGTTA CCATCGCCGC TACCTTTTTG TTCCGCAACC GTCGCGAGGA AGAGATGTTC
GAGGAACTGT TCGTCCGGCA GACCACGGGA TACGGCATGG CCAAGGCGGC CAAGCACTGA
 
Protein sequence
MRYLFLPLLM VLIFGTSALA ADVSAQAAPG GPNAVAAAAA KAPPGLAASP QAPAAAAAKA 
QAPAPAPGGK KMQTNRTFTI SMFLLIIAAT AGIVVWASKS TTTASDYYAA GGGISGIQNG
WAIAGDFLSA ATFLGITGLM SLFGPDGFMY SVGIIISFLT ILLIIAEPCR NAGKYTLGDI
LAFRSSSRVV RAVAALSAVV VSIFYLLGQM VGAGKLMQLL LGIPYKVSII GVGALIIVYV
ALGGMKATTW VQIIKAALLM FTGVVLSVGI LWKSGFSLFA FFDSVATSPQ IQDHVRGVMK
HPVAQPGFDY GQRFLELGLF FKNPLDQVSL GLAWILGAAG LPHVMMRFFT VPNAKEARKS
VVASMFLIGL FLIMVSFLGF GAALYVTPQK IMALDKGGNM AGLMIAQYIG GGAGTVTGDL
LLAFVCAVAF ATILAVVSGL VLASSAAIAH DLYVNVIKKG KADQGTQIKV ARVASFFVGA
IAIVLGIACE NLNIAQLVGL ALAVVASANF PVLIFALFWK RFNSAGIIAG LVVGTVVTIG
ILMVSPNMTY PKKVAADAQK VVLALEKKQS EAGGLSAVEL KTLEKAKSDY VLNKEGTSLV
GLDAPLFPLK NPGILSVPIG FFVTIAATFL FRNRREEEMF EELFVRQTTG YGMAKAAKH