| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1419 |
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| Symbol | |
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| ID | 6781406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1636368 |
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| End bp | 1638137 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642767413 |
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| Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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| Protein accession | YP_002138234 |
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| Protein GI | 197117807 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0466182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TAATCTCCGG CAACGAAGCG ATTGCCTTGA GCTTTGAAGA TTCCGGCGGC
GTCTTCGCCT CCGGCTATCC CGGCACGCCC AGCACAGAAA CGCTGGAAGA GGTCGCCCGC
CTGGGAAACG TGTACTGCGA ATGGGCCCCG AACGAAAAGG TCGGGCTGGA ATCGGCCATC
GGCGCCTCCC TTGCGGGCGG CAGGGCGCTC GCCACCATGA AGCACGTGGG GGTGAACGTC
GCGGCCGACG CGTTGATGAC CCTCACCTAT ACCGGGGTGA ACGCGGGCCT CATCCTGATG
GCGGCCGACG ACCCGGGGAT GCACTCCTCC CAGAACGAGC AGGACAGCCG CAACTACGCG
AAGTTCGCCA AGATCCCGAT GCTCGACCCC GCCGATTCCC AGGAGGCCTA CGACTACGTC
CGGGCCGGGT TCGAGATCTC GGAGCGCTTC GACACCCCGG TTATGCTGCG CACCACCACC
CGGATCTCAC ACGCGAAGGG GGTCGTGGAG CAGAAGGGGA AGGTAGCGGC GAAGGTGGGA
GAGCTGGCGA AGGACGTGCC GAAGTACGTG ATGCTTCCCA ACTTCGGGAA GATCAAGCAC
GTCGCGGTCG AGGAGCGGCT CTTGAAGCTG CAGGCCTTCG CGGAGGAGTC TCCGCTTAAC
CGGGTGGAGA TGAACGACCC CGAACTGGGG ATCATCACCT CCGGCATCTC CTACCAGCAC
GCGAAAGAAG CGTTCCCGCA GGCCTCCTTC CTGAAGCTCG GGCTGGTGCA CCCGCTGCCG
GAGCAAAAGA TCCGCGACTT CGCCTCCAAG GTGGGGCGGC TCATGGTGGT GGAGGAGATG
GACGCCATCT TCGAGGAGCA GATCCGCGCC ATGGGGATCC GGGTCGACAT AGGCAAGGAC
CGCATCTCGC TTTGCGGCGA GGTCTGCGCC GACATCGTCC GCGAGGCTGC CGGCGCCCCG
GCCACCTCCG CGAAGACTAC GCCTGCGGGC GACCTCCCCC TGCGCCCCCC GACCTTCTGC
CCCGGCTGCG CCCACCGCGG CCTTTATTCC ATCCTGAGCA AGCTGAAGGT CTTCGTATCC
GGAGACATCG GCTGCTACAC CCTGGGCGCG CTCCCTCCCT TGAGCGCCAT GCATACCTGC
ATCTGCATGG GGGCCAGCAT CAGCGCTGCC CACGGCATCG CCAAGGTGAA CGAGATCGCG
GGGAGGACCG AAAAACCGGT GGCCGTCATC GGCGACTCCA CCTTCTTCCA TTCCGGCATC
ACCGGCCTTT TGAGCATGTC CTACAACGCG GGGAACGCCC TGGTCATCAT CATGGACAAC
CGCACCACCG GCATGACCGG CGGCCAGGAA AACCCCGGTT CCGGGAGGCA TATCCAGGGC
AATCCGGCAA AAGAGGTGGA CATGGTGTCG CTCGTGAAGG TGCTGGGAAT CGAAAACGTC
TTCGAGATCA ACTCCTACGA CTTGAAGGAG ACAGAGGCCG CCATCAGGCG CGGGTTGGAG
ACGCCTGGCC CCTACGTCCT CGTGGACAAA AACCCCTGCG TTCTGCGCTA CCGGGTGAAA
AAGCCGCTGG TTCAGGTCTC GGCCGAGAAA TGCACCGGTT GCCGCGCCTG CCTCAAGGCC
TCCTGCGTCG CCCTGGGACT CAAGGGCTCG GGAGAGAAGC CGAAGGTCTC CATCGACCCC
AACATCTGCA ACGGATGCGG GGTATGCAGC CAGCATTGTA AATTCGACGC CATGACCGTC
GCAAGCGGAG GGAGCCATGA AAGCATTTAA
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| Protein sequence | MKKIISGNEA IALSFEDSGG VFASGYPGTP STETLEEVAR LGNVYCEWAP NEKVGLESAI
GASLAGGRAL ATMKHVGVNV AADALMTLTY TGVNAGLILM AADDPGMHSS QNEQDSRNYA
KFAKIPMLDP ADSQEAYDYV RAGFEISERF DTPVMLRTTT RISHAKGVVE QKGKVAAKVG
ELAKDVPKYV MLPNFGKIKH VAVEERLLKL QAFAEESPLN RVEMNDPELG IITSGISYQH
AKEAFPQASF LKLGLVHPLP EQKIRDFASK VGRLMVVEEM DAIFEEQIRA MGIRVDIGKD
RISLCGEVCA DIVREAAGAP ATSAKTTPAG DLPLRPPTFC PGCAHRGLYS ILSKLKVFVS
GDIGCYTLGA LPPLSAMHTC ICMGASISAA HGIAKVNEIA GRTEKPVAVI GDSTFFHSGI
TGLLSMSYNA GNALVIIMDN RTTGMTGGQE NPGSGRHIQG NPAKEVDMVS LVKVLGIENV
FEINSYDLKE TEAAIRRGLE TPGPYVLVDK NPCVLRYRVK KPLVQVSAEK CTGCRACLKA
SCVALGLKGS GEKPKVSIDP NICNGCGVCS QHCKFDAMTV ASGGSHESI
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