Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1419 |
Symbol | |
ID | 6781406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1636368 |
End bp | 1638137 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642767413 |
Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
Protein accession | YP_002138234 |
Protein GI | 197117807 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0466182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TAATCTCCGG CAACGAAGCG ATTGCCTTGA GCTTTGAAGA TTCCGGCGGC GTCTTCGCCT CCGGCTATCC CGGCACGCCC AGCACAGAAA CGCTGGAAGA GGTCGCCCGC CTGGGAAACG TGTACTGCGA ATGGGCCCCG AACGAAAAGG TCGGGCTGGA ATCGGCCATC GGCGCCTCCC TTGCGGGCGG CAGGGCGCTC GCCACCATGA AGCACGTGGG GGTGAACGTC GCGGCCGACG CGTTGATGAC CCTCACCTAT ACCGGGGTGA ACGCGGGCCT CATCCTGATG GCGGCCGACG ACCCGGGGAT GCACTCCTCC CAGAACGAGC AGGACAGCCG CAACTACGCG AAGTTCGCCA AGATCCCGAT GCTCGACCCC GCCGATTCCC AGGAGGCCTA CGACTACGTC CGGGCCGGGT TCGAGATCTC GGAGCGCTTC GACACCCCGG TTATGCTGCG CACCACCACC CGGATCTCAC ACGCGAAGGG GGTCGTGGAG CAGAAGGGGA AGGTAGCGGC GAAGGTGGGA GAGCTGGCGA AGGACGTGCC GAAGTACGTG ATGCTTCCCA ACTTCGGGAA GATCAAGCAC GTCGCGGTCG AGGAGCGGCT CTTGAAGCTG CAGGCCTTCG CGGAGGAGTC TCCGCTTAAC CGGGTGGAGA TGAACGACCC CGAACTGGGG ATCATCACCT CCGGCATCTC CTACCAGCAC GCGAAAGAAG CGTTCCCGCA GGCCTCCTTC CTGAAGCTCG GGCTGGTGCA CCCGCTGCCG GAGCAAAAGA TCCGCGACTT CGCCTCCAAG GTGGGGCGGC TCATGGTGGT GGAGGAGATG GACGCCATCT TCGAGGAGCA GATCCGCGCC ATGGGGATCC GGGTCGACAT AGGCAAGGAC CGCATCTCGC TTTGCGGCGA GGTCTGCGCC GACATCGTCC GCGAGGCTGC CGGCGCCCCG GCCACCTCCG CGAAGACTAC GCCTGCGGGC GACCTCCCCC TGCGCCCCCC GACCTTCTGC CCCGGCTGCG CCCACCGCGG CCTTTATTCC ATCCTGAGCA AGCTGAAGGT CTTCGTATCC GGAGACATCG GCTGCTACAC CCTGGGCGCG CTCCCTCCCT TGAGCGCCAT GCATACCTGC ATCTGCATGG GGGCCAGCAT CAGCGCTGCC CACGGCATCG CCAAGGTGAA CGAGATCGCG GGGAGGACCG AAAAACCGGT GGCCGTCATC GGCGACTCCA CCTTCTTCCA TTCCGGCATC ACCGGCCTTT TGAGCATGTC CTACAACGCG GGGAACGCCC TGGTCATCAT CATGGACAAC CGCACCACCG GCATGACCGG CGGCCAGGAA AACCCCGGTT CCGGGAGGCA TATCCAGGGC AATCCGGCAA AAGAGGTGGA CATGGTGTCG CTCGTGAAGG TGCTGGGAAT CGAAAACGTC TTCGAGATCA ACTCCTACGA CTTGAAGGAG ACAGAGGCCG CCATCAGGCG CGGGTTGGAG ACGCCTGGCC CCTACGTCCT CGTGGACAAA AACCCCTGCG TTCTGCGCTA CCGGGTGAAA AAGCCGCTGG TTCAGGTCTC GGCCGAGAAA TGCACCGGTT GCCGCGCCTG CCTCAAGGCC TCCTGCGTCG CCCTGGGACT CAAGGGCTCG GGAGAGAAGC CGAAGGTCTC CATCGACCCC AACATCTGCA ACGGATGCGG GGTATGCAGC CAGCATTGTA AATTCGACGC CATGACCGTC GCAAGCGGAG GGAGCCATGA AAGCATTTAA
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Protein sequence | MKKIISGNEA IALSFEDSGG VFASGYPGTP STETLEEVAR LGNVYCEWAP NEKVGLESAI GASLAGGRAL ATMKHVGVNV AADALMTLTY TGVNAGLILM AADDPGMHSS QNEQDSRNYA KFAKIPMLDP ADSQEAYDYV RAGFEISERF DTPVMLRTTT RISHAKGVVE QKGKVAAKVG ELAKDVPKYV MLPNFGKIKH VAVEERLLKL QAFAEESPLN RVEMNDPELG IITSGISYQH AKEAFPQASF LKLGLVHPLP EQKIRDFASK VGRLMVVEEM DAIFEEQIRA MGIRVDIGKD RISLCGEVCA DIVREAAGAP ATSAKTTPAG DLPLRPPTFC PGCAHRGLYS ILSKLKVFVS GDIGCYTLGA LPPLSAMHTC ICMGASISAA HGIAKVNEIA GRTEKPVAVI GDSTFFHSGI TGLLSMSYNA GNALVIIMDN RTTGMTGGQE NPGSGRHIQG NPAKEVDMVS LVKVLGIENV FEINSYDLKE TEAAIRRGLE TPGPYVLVDK NPCVLRYRVK KPLVQVSAEK CTGCRACLKA SCVALGLKGS GEKPKVSIDP NICNGCGVCS QHCKFDAMTV ASGGSHESI
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