| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1383 |
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| Symbol | |
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| ID | 6781370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1599069 |
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| End bp | 1601528 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767377 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002138198 |
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| Protein GI | 197117771 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000597485 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGCG CCTTGCTGCT GGTGTTCGCC GTCATCATCT GGTTCATCGA AGGGAACAAC
CGGAAGAGCA AGCAGAGCGA CCTGAGTTCC AGGGCGAAAA CCATCGGCGG AACGGTGCAA
CTCACCCTGG ATGGGAACGA GAGCTACCTG GGCATGCTCG CCCTGGAGCA GGCCGCAGGG
AAACTGGACC GGCCCCTGTT CCAACAGCGG GCCAGCCGCT ACATCAACGA ACACCCGGAA
CTGATCAACA TCACCTGGGT GGACGCCGGC ATGTTCATCC GCGACGTGGC ACCTTTGGCC
CAGAACCGCC AGATACTGGG GCTGCATGTG GACTTGCCGG AGCCCAAGCG CGCCTCACGC
CTCGCCAGGG ACCTGCGCCT GCCGGTCTAC ACCAGCCCCT TCCAGGCCAT ACAGGGAGTG
ACCTCCTTTG AAGTATGGGT TCCCGTCTAC CGGGACGACA CCTTTTTGGG CCTGTTCGCC
GGGGTCTACT CCTGCGAAAA GCTGCTGGAA CAGCTGGTCT CGCAGGTCCG TCCGCGCTTA
TACCACCTGA GCCTGGTCGA CAGGTACGAT TCGGTGCTGG CGTCCTACCC AGTCCAGGGG
ACCCTGGACA AAAACCTGTC CAAGGAGGTG CTCATCACCC CCGAGGACAG CGGCGTCGTG
CTGCGCATCG AGAGGTATGA GACCGGCTCC GAGTGGCGCC TCATGATTTT GAAGTTCCTC
TCTCTGGCGC TGGTCCCGGG GCTAGGCTAC ACCCTGTGGA ACTTAAAGCG CGAGATGGAC
GAGCGCAGGC GGGTCGAGGA GGCGCTCAAA GAGCAGGCGA TGACGCTGGA GCAGGAGGTC
AGGGAGCGCA AGGCCGCGCA GGAGCATCTG CAGGACCAGG CGGTCCTTCT GGAGGAGCAG
ATCGACGAAC GCTGGCAGGC GGAAGAGGCG CTTAGGGCAA GCGAAGAAAG ACTGCGCCTC
TTGCTCGATT CAGCGGGGGA GGCGATCTAC GGCATAGACC TTGAGGGAAA CTGCACCTTC
TGCAACAAAG CCTGCCTCAG GATGCTGGGA GCCGACTCCC CGGAGCAGTA CCTGGGGCGC
AACATGCACG AGATCATCCA CCACTCCTAC CCCGACGGCA CCCCGATGCC CCGAAAGGAG
TGCATGGTGC ACCAGACCTT GCGGGAGGAG CAGGGATGCC ACGTGAACGA CGAGGTCTTC
TGGCGCGCGG ACGGTAGCAG CTTTCCGGTC GAGTACTGGT CCCATCCCCA GGTGAAGGGG
GGGAAGGTGG TGGGCGCAGT CGTCGCCTTC ATCGACATCA CGGACCGCAA GCGCCTGGAG
GAACAGTACC GCCAGTCGCA GAAGATGGAA TCGGTGGGGC GGCTGGCCGG GGGGGTGGCG
CACGACTTCA ACAACATGCT GAGCGTCATC CTGGGAGCCG CGGAATTGAG CAGACGCAAG
CTGGAGGAAG GCGAGCCGAT AGACGCCTAC CTGGAGGTGA TCACCAACGC CGCCAAGCGC
TCCAGCGAGA TCACCCGGCA GCTCCTCGCC TTCTCGCGCA AGGAGGTAGT TTCGCCCCGT
CCGCTGGACC TGAACCAGCT GATCCGGGAG TCCAACAAGA TCCTGGCCAG GCTGATCAGC
GAGGACATAA ACCTCTCTTT CACTCCCGAC CCGGGGCTTT GGCTCGTCTC TATCGACCCT
TCCCAGGTGG ACCAGATCCT GATGAACCTG GCGGTGAACG CCCGCGACGC CATGCCCAAC
GGCGGCAGGC TCAGCATAGA GACCAGGAAC CTCCGCCTGA CCGGCGATTG CAGCCACGTC
CACCCCGACG CGCATCCCGG TGATTACGTG CAGCTGACGG TGAGCGACAC CGGGCAGGGG
ATGGACAAGG CGACGGTCGA GCACATCTTC GAGCCTTTTT TCACCACCAA GGAACTGGGC
AAGGGGACGG GGCTCGGGCT TGCGACCGTC TACGGCATCG TCACCCAGAA CAGGGGTTTC
ATCAACGTGT ACAGCGAACC GGGCCAGGGG ACCGTGTTCA GGATCAACCT GCCGCGACTG
GCGGACCAGG CCGATGGGGC TTCCGGCCAG GAGCAGGCGG CGCCGGCGCT GTCGGGAACG
GTACTGCTCG TCGAGGACGA GGAGATGCTG CTCTGGCTGG CGACGAAGCT TTTGGAGGAG
CTGGGGTTCA GCGTGATCCA GGCGCCGGGC CCGCGGGAGG CGATCGCGAT CTGCGAGGAC
CCGGGACTGA ACCTCGACCT CATCCTGACC GACGTGGTGA TGCCGGAGAT GAACGGCAGC
GAGATGGTAG CGAAGATCAA GCAGACCCGC CCCGATCAGA AGGTGCTCTT CATGTCCGGT
TACACCTCTG ACGACGTGGT GCAGCGCGGC ATCCTGGAAC AGGGGATGCA GTACATCCAA
AAACCTCTGG ACCTTCGCGA ACTGGGAGAG AAAATCGGAC AGATACTGGC GGGAAACTGA
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| Protein sequence | MLGALLLVFA VIIWFIEGNN RKSKQSDLSS RAKTIGGTVQ LTLDGNESYL GMLALEQAAG
KLDRPLFQQR ASRYINEHPE LINITWVDAG MFIRDVAPLA QNRQILGLHV DLPEPKRASR
LARDLRLPVY TSPFQAIQGV TSFEVWVPVY RDDTFLGLFA GVYSCEKLLE QLVSQVRPRL
YHLSLVDRYD SVLASYPVQG TLDKNLSKEV LITPEDSGVV LRIERYETGS EWRLMILKFL
SLALVPGLGY TLWNLKREMD ERRRVEEALK EQAMTLEQEV RERKAAQEHL QDQAVLLEEQ
IDERWQAEEA LRASEERLRL LLDSAGEAIY GIDLEGNCTF CNKACLRMLG ADSPEQYLGR
NMHEIIHHSY PDGTPMPRKE CMVHQTLREE QGCHVNDEVF WRADGSSFPV EYWSHPQVKG
GKVVGAVVAF IDITDRKRLE EQYRQSQKME SVGRLAGGVA HDFNNMLSVI LGAAELSRRK
LEEGEPIDAY LEVITNAAKR SSEITRQLLA FSRKEVVSPR PLDLNQLIRE SNKILARLIS
EDINLSFTPD PGLWLVSIDP SQVDQILMNL AVNARDAMPN GGRLSIETRN LRLTGDCSHV
HPDAHPGDYV QLTVSDTGQG MDKATVEHIF EPFFTTKELG KGTGLGLATV YGIVTQNRGF
INVYSEPGQG TVFRINLPRL ADQADGASGQ EQAAPALSGT VLLVEDEEML LWLATKLLEE
LGFSVIQAPG PREAIAICED PGLNLDLILT DVVMPEMNGS EMVAKIKQTR PDQKVLFMSG
YTSDDVVQRG ILEQGMQYIQ KPLDLRELGE KIGQILAGN
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