Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1368 |
Symbol | |
ID | 6781355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1575041 |
End bp | 1576756 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642767362 |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_002138183 |
Protein GI | 197117756 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAG AGCGCATCGT CATTGACCCG ATCACCAGGA TCGAGGGGCA CCTGAGAATA GAGCTTGAGG CGGAGGGGGG GAGAATCGGC AACGCCTGGG CCTGCGCCAC CCAGTTCCGG GGAATCGAAA AGATCCTCGA AGGACGGGAC CCGCGAGACG CCTGGGCTTT CGCGCAGCGC ATCTGCGGGG TCTGCACCGG CGTCCACGCC ATCGCCTCGA TACGGGCCGT CGAGGACGCC ATCAAATGCC GCATCCCCGA GTCGGCAGAG TTGATCCGGA ACCTGGTCTC CGGGATGGCG ACCCTACAGG ACCACGTCAT GCATTTCTAC CACCTGCACG CCCTTGACTG GGTGGACGTG ATGAGCGCGC TTGCCGCCGA CCCAGCCGCC ACCTCGCGCC TTGCCGCCTC CGTCTCCCCC TGGCCCAACA ACTCCGCCTC CTGGTTCAAG GAGGTGCAGC AGCGGGTCGC GACCTCGGCC AAGGGAGGGC TCGGGATCTT CGCTTCCGGC TACTGGGGGC ACCCCGCCTA CCGCCTCCCT CCCGAGGCGA ACCTGATGGC GGTCGCCCAC TACCTGGAGG CGCTCAAGTG GCAGCGCGAG ATCATCAAGC TCCACACCAT CTTCGCCGGG AAGAACCCCC ACCCCAACTA CCTGGTGGGG GGGATGGCGA CCTCCATCAA CCTGGACAAC CAGCTCACCA TCAACAAGGT GCGTCTGGAC CAGTTGGGGG AACTGATCCG GGAAGCACGC CGCTTCGTCG ACGAGGTGTA CTACCCCGAC GTCATGGCCA TCGCCGGCTT CTACCCCGAA TACGCCTCCA TCGGCGTCTC CTCCCCCACC CTCATGGCCG TAGGCGAGAG CGCCTTCTCC TGCGCCGGCA CGCCGGCCGG AAAGCCGGTC GCAGCAGGTC TCCTCATGGA CGGCGACTAC CGAACCTCAC ACCCTTTCAA CCCCAGGATG GTCGCCGAGT ACGTCTCCTC CGCCTGGTAC CTCTATCCGG AGGGGGACCG GCAGGGGCTG CACCCGTGGC AGGGTAGGAC GGAGCCCAAC TACACCGGTC CCAAGCCCCC CTACCGCCAG CTTTCCGACC AGGAGAAGTA CACCTGGTGC AAGGCGCCGC GCTACGACGG CCGCCCGGTC CAGGTCGGCC CCAACGCGAG GATCATGCTG GCCTACGCCC AGGGGCACCC AGATACGGTG CAGCTCGCCA ACCGGGACCT GGGAAAACTG AAAGCCGGGG TCGAGGCGCT CAATTCCACG CTCGGGCGCA CCTACTGCCG CGCCCTGGAA TCGGTCATCC TCGCCCGGCG CATGGAGGAA TGGTTCGCGG CCTTGAACGA GCGGATCAGG TCCGGCGACG TCTCCACCTT CAACGCCGAA CTCTGGGAGC CGGAAAGCTG GCCCAAACAA GCGCAGGGAA TGGGTTACCT GGAGGCCGCG CGCGGGACGC TCTCGCACTG GGTGGAGATA GAAAACGGGC GCATCGCCCG CTACCAGTGC GTGGTTCCCA GCACCTGGAA CAGCTCGGGG CGCGATCCCA ACGGCCTGAT GGGCCCCTAC GAGCAGGCCC TGGCGGGGGA CAAGAAGCAT CCGCTGGTCG ACCCCAAGCG CCCCGTCGAG GTGTTGCGCA CCATACACTC CTTCGACCCG TGCCTATCCT GCGCCGTGCA TCTGCTGGTG CCGGGGGGGC CGGCGTTTGA GGTGAAAGTG CGATGA
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Protein sequence | MATERIVIDP ITRIEGHLRI ELEAEGGRIG NAWACATQFR GIEKILEGRD PRDAWAFAQR ICGVCTGVHA IASIRAVEDA IKCRIPESAE LIRNLVSGMA TLQDHVMHFY HLHALDWVDV MSALAADPAA TSRLAASVSP WPNNSASWFK EVQQRVATSA KGGLGIFASG YWGHPAYRLP PEANLMAVAH YLEALKWQRE IIKLHTIFAG KNPHPNYLVG GMATSINLDN QLTINKVRLD QLGELIREAR RFVDEVYYPD VMAIAGFYPE YASIGVSSPT LMAVGESAFS CAGTPAGKPV AAGLLMDGDY RTSHPFNPRM VAEYVSSAWY LYPEGDRQGL HPWQGRTEPN YTGPKPPYRQ LSDQEKYTWC KAPRYDGRPV QVGPNARIML AYAQGHPDTV QLANRDLGKL KAGVEALNST LGRTYCRALE SVILARRMEE WFAALNERIR SGDVSTFNAE LWEPESWPKQ AQGMGYLEAA RGTLSHWVEI ENGRIARYQC VVPSTWNSSG RDPNGLMGPY EQALAGDKKH PLVDPKRPVE VLRTIHSFDP CLSCAVHLLV PGGPAFEVKV R
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