Gene Gbem_1310 details

Gene Information

• Locus tag: Gbem_1310
• Symbol: dut
• ID: 6781297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1514323
• End bp: 1514763
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642767304
• Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
• Protein accession: YP_002138125
• Protein GI: 197117698
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0756] dUTPase
• TIGRFAM ID: [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000379485
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAGCC TGCCTGTCCG GATAAAGAGG TTGAGAGCAA CCCCGCTGCC GGCCTACATG 
ACCGAGCACG CGGCCGGCGT CGACCTCTGC GCGTCGCTCT CCGCCGATTT CGTGCTGGCG 
CCTGGCGAGA GGGCACTGGT ACCCACCGGG CTTGCCATAG AACTCCCGCC GGGGTTCGAG 
GCGCAGGTGA GGCCGAGAAG CGGGCTCGCT TTACGCCACG GCATCGCGCT TGTTAACTCG 
CCGGGAACCA TTGACGCCGA CTACCGCGGC GAGATCGGGG TGATCCTGAT CAACCTGGGG 
AGCGAGCCGT TCACGGTGAG CGACGGCGAG CGTATCGCCC AGATGGTTTT TGCCCGCTGT 
GAGCGTGCCG AGTTCATTGA GGTCGATGAG TTAGGCGACA CCGCGCGCGG CGCCGGCGGC 
TTCGGGCATA CGGGTAGATA G 

 

Protein sequence

MGSLPVRIKR LRATPLPAYM TEHAAGVDLC ASLSADFVLA PGERALVPTG LAIELPPGFE 
AQVRPRSGLA LRHGIALVNS PGTIDADYRG EIGVILINLG SEPFTVSDGE RIAQMVFARC 
ERAEFIEVDE LGDTARGAGG FGHTGR