| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1308 |
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| Symbol | |
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| ID | 6781295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1510921 |
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| End bp | 1513011 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767302 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002138123 |
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| Protein GI | 197117696 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00697732 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACACA CCGTACAGGC AGAATGCTGT GGCAAGACAA TCACCATCGA AACGGGAAAG
ATCGCGAAGC AGGCCAGCGG CGCAGTCATG ATCAAAAGCG GCGACACCAT GGTGCTCGTC
ACCGCCGTCG CCATGAAGAG CGCCAAGGAA GGGCAGGGGT TCTTCCCGCT CACCGTCAAC
TACCAGGAGA AGGCGTACGC GGGCGGCCGC ATCCCCGGGT CCTTCTTCAA GCGCGAGGGG
CGTCCCTCCG ACAACGAGAC CCTGACCTGC CGTCTCATCG ACCGCCCGAT CCGTCCGCTG
TTCCCGGAGA ACTTCCTTAA CGACACCCAG ATCATGGCGA CCGTGGTTTC GGCCGACAAG
GACAACGACC CCGGCATCCT CTCCATGATC GGCGCCTCCG CGGCCCTGAT GGTTTCCGAC
GTCCCCTTCG CAGGCCCCAT CGCCGGCGTC AAGGTCGGCC GCGTCGACGG CCAGTTCATC
GCCAACCCGA CTGCGGAGCA GGAAGAAAAG AGCGACCTCG AGATCGTGAT CGCCGCCAGC
CAGGACGCAA TCCTGATGGT GGAAGGTTCC GCCTGCGAGG TTTCCGAGGA CGACCTGCTG
GAAGCCATTT TCTTCGGCCA CAAAGCGGTG CAGCCGGTCC TCGCCGCCCA GCTCGAGCTC
GCCAAGAAAG TCGGCACCTC GAAGCGCGAA ATCCCGGCGC CGGTGGTGAA CGAGGCGCTG
AAGGCGCGCG TATCCGCTCT CGCCAAAGAG GGGATGAAGC AGGCGGTCCG CATCAAGACC
AAGGTGGAGC GCCACCTGGC CATCGACGCC ATCGCGGACG AGACCGTCGC GGCACTTTCG
GCCGAGTTCG AAGGCTCCGA GAAAGAAATC AAAGGTTTCA TCGAAGACCT CGAGTACGAC
CTCGTGCGTG AGCACATCAT CAAGGACGGC CAGAGGATCG ACGGGCGCGA TACCAAGACC
ATCCGCGCCA TCTCCACCGA AGTAAGCCTG CTCCCCCGCG CCCACGGCTC CGCCCTGTTC
ACCCGCGGCG AGACCCAGTC CATCGTGGCG GCGACGCTCG GCACCTCGGT CGACGAGCAG
CGCATCGACT CGCTCTACGG CGACTCCAGG AAGAAGTTCA TGCTGCACTA CAACTTCCCT
CCGTACTCCG TCGGCGAGAC CAGCTTCCGC CTTGCCCCGG GGCGCCGCGA GATCGGCCAC
GGCATGCTCG CCGAGCGCGC CCTGCAGCAG GTGCTCCCGA AGCATGACGA CTTCCCCTAC
ACCATCAGGA TCGTTTCCGA CATCACCGAG AGCAACGGCT CCTCTTCGAT GGCGACCGTC
TGCGGCGGCT CGCTGTCCAT GATGGACGCA GGCATCCCGA TCAAGGCGCC GGTTGCCGGC
ATCGCCATGG GCCTCATCAA GGAAGGCGAC GATTTCGCCA TCCTCTCCGA CATCCTCGGC
GACGAAGACC ACCTGGGCGA CATGGACTTC AAAGTGGCCG GTACCGCCGA AGGCGTCACC
GCGCTGCAGA TGGACATCAA GATCGGCGGC GTCACCCGCG AGATCATGAG CGCGGCGCTG
GCTCAGGCCA AGGCAGGCAG GATCCACATC CTGGGCGAGA TGGCCAAGAC CATCGGGGCA
TCGCGCGGCG ACCTCTCCGC CTTCGCGCCT CGCATCACCA CCATCTGGGT CAAAGTCGAC
AAGATCCGCG ACGTCATCGG GAGCGGCGGC AAGAACATCA GGAGCGTCAC CGAGGCGACC
GGCGTCTCCA TCGACATCGA CGACACCGGC AAGATCAACA TCGCTTCCAC CAACAAGGAA
GCCTGCGACC TCGCCATCAA GATGATCAGG AACCTCACCG CCGAGGCCGA GGAAGGGAAG
CTCTACATGG GCACCGTCAA AAAGATCATG GAGTTCGGCG CCTTCGTGGA GATCTTCCCG
GGAACCGACG GCCTGGTCCA CGTCTCCGAG CTCGACACCG AGCGCGTCAA GAACGTGAGC
GACATCCTCA AAGAGGGCGA CAAGGTCCTG GTCAAGTGCA TCGGCATCGA CAAGCAGGGC
AAGATCAAGC TGTCCCGTAA AGAGGCTCTG GGACTGACTT TCACCGAATA A
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| Protein sequence | MVHTVQAECC GKTITIETGK IAKQASGAVM IKSGDTMVLV TAVAMKSAKE GQGFFPLTVN
YQEKAYAGGR IPGSFFKREG RPSDNETLTC RLIDRPIRPL FPENFLNDTQ IMATVVSADK
DNDPGILSMI GASAALMVSD VPFAGPIAGV KVGRVDGQFI ANPTAEQEEK SDLEIVIAAS
QDAILMVEGS ACEVSEDDLL EAIFFGHKAV QPVLAAQLEL AKKVGTSKRE IPAPVVNEAL
KARVSALAKE GMKQAVRIKT KVERHLAIDA IADETVAALS AEFEGSEKEI KGFIEDLEYD
LVREHIIKDG QRIDGRDTKT IRAISTEVSL LPRAHGSALF TRGETQSIVA ATLGTSVDEQ
RIDSLYGDSR KKFMLHYNFP PYSVGETSFR LAPGRREIGH GMLAERALQQ VLPKHDDFPY
TIRIVSDITE SNGSSSMATV CGGSLSMMDA GIPIKAPVAG IAMGLIKEGD DFAILSDILG
DEDHLGDMDF KVAGTAEGVT ALQMDIKIGG VTREIMSAAL AQAKAGRIHI LGEMAKTIGA
SRGDLSAFAP RITTIWVKVD KIRDVIGSGG KNIRSVTEAT GVSIDIDDTG KINIASTNKE
ACDLAIKMIR NLTAEAEEGK LYMGTVKKIM EFGAFVEIFP GTDGLVHVSE LDTERVKNVS
DILKEGDKVL VKCIGIDKQG KIKLSRKEAL GLTFTE
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