| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1306 |
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| Symbol | |
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| ID | 6781293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1509467 |
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| End bp | 1510354 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642767300 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002138121 |
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| Protein GI | 197117694 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000236822 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACG GCTTTTTTGT GATCGACAAG CCGGCCGGTG TCACCTCGCA TGACATCGTG
TCCAAGGTGC GTCGCGCCAT CAACCAGAAA AAAGTGGGGC ATACGGGAAC GCTCGACCCC
TTCGCCACAG GCGTGCTGCC CGTTGCCGTG GGCGAAGGGA CCAAGGCGAT CCAGTTCCTG
GACGAGTCGG AGAAGGAGTA CCGCGCCGTA ATGAGGCTCG GTATCGCCAC CGACACCCAG
GATCTCACCG GCCAGGTGCT GGCGGAGCGC GACTGGTCGC AGTTGGAAGC AGCCGACCTG
GAGCGGCTGG TGCCGCAGTT TCTGGGTCTC CAAAAGCAGA TGCCTCCCAT GTTTTCGGCC
ATCAAGCAGG GGGGCGTTCC GCTCTACAAG CTGGCCAGAA AGGGGATCGA GGTGGAGCGC
GAGGCGCGCG AGGTGGAAAT CCACTCGCTT AGCTTTGACT GGATCCGCCT ACCCGAGGCG
TGCTTCACCG TTACCTGCTC GCGCGGCACC TACGTGAGGA CCCTTGCCTG CGACATCGGC
GAGGCTCTTG GGTGCGGGGC GCACCTGTTG GAGCTGCGGC GCACAAGGAG CGGGCTTTTC
CGCGAAAAAG ACGCCATCAG CATAGAGGCG CTGGCTGCGG CCGCGAACCA GCAGGACCTG
ATCCTCCCGC TGGACCGGGC GCTCGACCAC CTGCGCAGGC TGGAGCTGTC CGAGGCGGGG
GGGAGGAAGG TGCAAAACGG CGTGGTGCCG CTAGCTGCCG ATTTCACCGA GGCGACTGGA
GAGTTTCAGC AGGGCGAACA GGTGCGACTC TATCAGGGGG AGCGCTTCGC TGCAGTAGCC
GAGTACGACA TGCTCAAAGG GCTGCGATTG GCGCGTGTAT TCAACTAG
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| Protein sequence | MLNGFFVIDK PAGVTSHDIV SKVRRAINQK KVGHTGTLDP FATGVLPVAV GEGTKAIQFL
DESEKEYRAV MRLGIATDTQ DLTGQVLAER DWSQLEAADL ERLVPQFLGL QKQMPPMFSA
IKQGGVPLYK LARKGIEVER EAREVEIHSL SFDWIRLPEA CFTVTCSRGT YVRTLACDIG
EALGCGAHLL ELRRTRSGLF REKDAISIEA LAAAANQQDL ILPLDRALDH LRRLELSEAG
GRKVQNGVVP LAADFTEATG EFQQGEQVRL YQGERFAAVA EYDMLKGLRL ARVFN
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