Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1298 |
Symbol | |
ID | 6781285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1499588 |
End bp | 1500964 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642767292 |
Product | threonine synthase |
Protein accession | YP_002138113 |
Protein GI | 197117686 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000609388 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACA TAAGCACCAG GGGAAAGATA GCGCCGGTCG GTTTCAAGGA CGCGGTCATG ATGGGACTTG CCACCGACGG CGGGCTGATT CTTCCGGAAT CAATCCCGCA GCTCGACCGC GGCACCTTGG CCGCCTGGTC CAAGCTCCCC TACCGCGAGC TTGCCTTCAA CGTCATCTCC CTTTTCGCCA CCGACATACC GGCTTTCGAC CTGAAGGCGC TCATCGACCG TTCCTACGGC AGCTTCGAGC ACGAGGAGAC CACGCCGCTG GTGCAAAAGG ACGGCGTCTA CATATTGGAG CTCTTCCACG GCCCCACCCT CGCCTTCAAG GACGTGGCGC TGCAGCTTCT TGGGAACCTC TTCGAATACC TTTTGAAGGA GCGCGGGGAG AAGATGAACA TCCTCGGCGC CACCTCGGGC GACACCGGGA GCGCGGCCAT TGCCGGGGTG CGCGGCAAGG AGAACATCAA CATCTTCATC CTGCATCCGC ACCTGAAGAC CTCGCCGATC CAGGCGCTGC AGATGACCAG CGTACTCGAC GAGAACGTGC ACAACGTCGC GGTGGAGGGG ACCTTCGACG ACTGCCAGAA CATCGTGAAG GCCCTCTTCA ACGACCTGCA GTTCAAGAAG GAGTACGCGC TCGGCGCGGT GAACTCGATC AACTGGGCGC GCGTTTTGGC CCAGGTGGTC TACTACTTCT ACGCCTGGGG TAGGCTCCCG GAGCAAAAAG AGGTGATCTT CTCCGTCCCC ACCGGCAACT TCGGCGACAT CTTCGCCGGC TACCTCGCGA AAAGGATGGG GCTCCCGGTG GAGAAGCTGC TTTTGGCCAC CAACGAGAAC AACATCCTCG CCCGCTTCGT GCAAACCGGC GACTATTCGC TCGGGAAGGT GGTGCAGACC GTCTCCCCCT CCATGGACAT CCAGCTCGCC TCCAACCTTG AGCGCTACCT CTACTACCTC TGGGACGAGA ACCCGGAGAA GGTCTGCAGC GCCTTCGCCG AATTGCAGTC GACCGGCAGG ATCGTGTTCA CCAAGGAGCA GGTGCTAAGG GTGCAGGCGG AGTTCATGAG CTGCACGGTG GACGAGCAGA AGACCCTGGA TACCATCGCC TCCTTCAACC GCGAAACCGG CTACCTCCTC GACCCACACA CCGCGGTCGG CGTGCGCGGC GCCCTGGAAT GCGCGCCGGG TCACCCGAGG GTGGTCTGCC TCGCCACGGC ACACCCGGCG AAATTCGGGG ATGCCGTCGA GCGCGCCGTA GGCTCACCTC CCCCGCTTCC CCCGGCACTC GCGGCCCTGG TGGGTAAAGA GACCCGCTGC GAGCTGATGG CGCCCGACCG GGAGAAGATC AAGGCGTTCG TCAAGGCCAA GGCGTAA
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Protein sequence | MKYISTRGKI APVGFKDAVM MGLATDGGLI LPESIPQLDR GTLAAWSKLP YRELAFNVIS LFATDIPAFD LKALIDRSYG SFEHEETTPL VQKDGVYILE LFHGPTLAFK DVALQLLGNL FEYLLKERGE KMNILGATSG DTGSAAIAGV RGKENINIFI LHPHLKTSPI QALQMTSVLD ENVHNVAVEG TFDDCQNIVK ALFNDLQFKK EYALGAVNSI NWARVLAQVV YYFYAWGRLP EQKEVIFSVP TGNFGDIFAG YLAKRMGLPV EKLLLATNEN NILARFVQTG DYSLGKVVQT VSPSMDIQLA SNLERYLYYL WDENPEKVCS AFAELQSTGR IVFTKEQVLR VQAEFMSCTV DEQKTLDTIA SFNRETGYLL DPHTAVGVRG ALECAPGHPR VVCLATAHPA KFGDAVERAV GSPPPLPPAL AALVGKETRC ELMAPDREKI KAFVKAKA
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