| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1221 |
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| Symbol | |
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| ID | 6781205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1414186 |
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| End bp | 1416381 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642767212 |
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| Product | helicase, RecD/TraA family |
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| Protein accession | YP_002138036 |
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| Protein GI | 197117609 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGA CACCCCCAAC AGAAAACGTC GACAGGCTCT CCGGATCGCT GGAGCGCGTC
ACCTTTCACA GCGAGGAGAC CGGGTTTTGC GTGCTGCGGG TGAAGGTTGC CGGGCAGCGC
GACCTGGTGA CGGTGACGGG CGCCGCGGCC TCGGTTACGC CGGGGGAGTA CCTTGAGTGC
ACCGGCTCCT GGCACAACGA CCGGACCCAC GGCATGCAGT TCAAGGCCGG GCACATCAAG
GTGGTTCCCC CCACCACGCT GGAAGGGATC GAGAAGTACC TGGGTAGCGG CATGGTGCAC
GGCATCGGGG CCCACTTCGC CAAGGTGCTG GTGAAATCGT TCGGCGCGGC GGTCTTCGAC
GTCATAGAGA ACCACCCGGA GAGGCTCCTG GAACTCCCGG GGATCGGCCG CAAGCGGATG
GAATCGGTCG CCGGCGCCTG GGTGGAGCAG AAGGCGATCC GGGACATCAT GGTGTTCCTG
CAGTCCAATG GCCTTGGAAC CGCCCGCGCC GTGAGGATCT ACAAGAGCTA CGGCAACGAA
GCGATCTTCA AGGTGACCGA AAACCCGTAC CGGCTGGCCC TGGAGATCCA TGGCATAGGT
TTCAAGACTG CCGACCTCCT GGCTGCCAAG CTGGGGATAG CGCCCGATTC CATGATCCGG
GCCCAGGCGG GGGTGCGGCA CGTGCTGCAG GAGATGTCGG CCGGCGGGCA CTGCGCCAGC
CTGCGGGCGG AACTGGCCGA GAGCGCAGCT ACTCTGCTGG AGATCCCTCA ACCGGTAATC
GAATCCGCCA TCGAGGCGGA ACTCGCCGAG GAGAACCTGG TCGCCGACCA GATCTCCGGC
TCCCCCTGCG TCTTCCTGGC GCCGCTCTAC AAGGCGGAGG TAGGCGTAGC CTCCGGCATT
TGCCGGCTTC GCGCCGGCAC GCCCCCTTGG GGCGGCATCG TCGCCGAAGA GGCGATCCCG
TGGGTGGAGA GCCAAAAAGG AATCACCCTT TCCGCCTCGC AGCGCGATGC GATTCGGCTC
GCGCTTAAGA GCAAGGTGGT CGTGGTGACC GGCGGACCGG GGGTGGGTAA GACCACGCTG
GTCAACAGCA TCCTGGGTGT CATCGGCAGA AGGCCGCTCC GGGTCACCCT CTGCGCGCCG
ACGGGGAGGG CAGCCAAGCG CCTCGCCGAA TCGACCGGGA TGGAGGCGAA GACCATCCAT
CGGCTCTTGG AGTTCGACCC GCAGACCTTC GGCTTCAAGC GCTGCAAGGA GAACCCGCTT
CACACCGACC TCCTGGTCAT GGACGAGGCG TCCATGGTCG ACGTCGTGTT GATGAACAAG
CTCCTTCCCG CCATTCCCGA CCATGCCGGC CTCATCATCG TGGGGGACGT GGACCAGCTC
CCCTCGGTGG GGCCAGGCTG CGTCCTCTCC GACATCATCG AGTCCGGCGC GGTTCCGACG
GTACGGCTCA CCGAGATCTT CCGGCAGGCC GCAGGCTCCA GGATCATCGT CAACGCCCAC
CGCATCAACC GGGGTGAGCT GCCGCTGAAG GACGAGGGGA AGGAGCTCGC CGACTTCTAC
TTCATCCCGG CGGCGACGCC CGAGGATATC CACGACAAGC TCCTGCAGGT GGTCAGGGAG
CGGATACCCA AGCGCTTCGG CTTCGATCCG GTGCGCGAGG TCCAGGTGCT TACGCCGATG
AACCGCGGGG GGCTCGGGAC CAGGTCCCTC AACGCCGAGT TGCAGGGGGT GCTGAACGGC
AGGGCCGAGC CGAAGGTGGA GCGCTTCGGC ACCAGCTACG CCCCCGGGGA CAAGGTGATC
CAGACGGTGA ACAACTACGA GAAGGAGGTC TTCAACGGGG ACATCGGACG CATAGTCGAG
ATCCGCTCCG AAGAAAGCGC CCTCATCGTG GACTTCGATG ACCGGCTGGT GGAATATGCA
TTCGCCGAAC TGGACGAGGT GAGCCTTGCC TACGCCACCA GCATCCACAA GAGCCAGGGG
TCCGAGTACA CGGCCGTGGT GATCCCGCTT GCCATGCAGC ACTACACCAT GCTGGAGCGA
AACCTCCTGT ACACCGCCGT CACCCGCGGC AAGAAGCTCG TGGTGGTGAT CGGCGAGCAG
AAGGCGCTCG CCATGGCGGT GCAAAACCAG AAGTCCCACC GCCGCCTGAC CAAGCTGGCG
GGGAGGATCG GACAGAAAGG AGACGGGATA ACATGA
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| Protein sequence | MKETPPTENV DRLSGSLERV TFHSEETGFC VLRVKVAGQR DLVTVTGAAA SVTPGEYLEC
TGSWHNDRTH GMQFKAGHIK VVPPTTLEGI EKYLGSGMVH GIGAHFAKVL VKSFGAAVFD
VIENHPERLL ELPGIGRKRM ESVAGAWVEQ KAIRDIMVFL QSNGLGTARA VRIYKSYGNE
AIFKVTENPY RLALEIHGIG FKTADLLAAK LGIAPDSMIR AQAGVRHVLQ EMSAGGHCAS
LRAELAESAA TLLEIPQPVI ESAIEAELAE ENLVADQISG SPCVFLAPLY KAEVGVASGI
CRLRAGTPPW GGIVAEEAIP WVESQKGITL SASQRDAIRL ALKSKVVVVT GGPGVGKTTL
VNSILGVIGR RPLRVTLCAP TGRAAKRLAE STGMEAKTIH RLLEFDPQTF GFKRCKENPL
HTDLLVMDEA SMVDVVLMNK LLPAIPDHAG LIIVGDVDQL PSVGPGCVLS DIIESGAVPT
VRLTEIFRQA AGSRIIVNAH RINRGELPLK DEGKELADFY FIPAATPEDI HDKLLQVVRE
RIPKRFGFDP VREVQVLTPM NRGGLGTRSL NAELQGVLNG RAEPKVERFG TSYAPGDKVI
QTVNNYEKEV FNGDIGRIVE IRSEESALIV DFDDRLVEYA FAELDEVSLA YATSIHKSQG
SEYTAVVIPL AMQHYTMLER NLLYTAVTRG KKLVVVIGEQ KALAMAVQNQ KSHRRLTKLA
GRIGQKGDGI T
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