| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1213 |
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| Symbol | |
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| ID | 6781197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1405839 |
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| End bp | 1407158 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642767204 |
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| Product | protein of unknown function DUF107 |
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| Protein accession | YP_002138028 |
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| Protein GI | 197117601 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00310663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAGAC TCTTATTGCT GGCGTTGCTG GTTCTGGGGC TAGTGCTGCC GATGCGGCTT
TTCGGGGAGC AACCGCAGGT GGCGGTCATC TCGGTGCGCG GCCCGATCAA CCCGGTCACC
TCAAGCTATC TGAAGCAGAG CCTGGAGGCG GCGGGAAAGC GCGGGGACCG GCTCCTCATG
GTCGAGCTGG ACACGCCAGG GGGGCTGGAT ACGGCGATGC GCGACGCGGT GCAGGCCATC
TTCGCAAGCC CCGTCCCGGT CGCGGTCTAC GTCACGCCGT CCGGGGCTCG CGCCGCTTCG
GCAGGGGCGG TGATAGGGCT GTCGGCGGAC GTCCTGGCCA TGGCCCCGGG GACCAACATC
GGCGCCGCGC ATCCGGTGGG GCTTGGGGGC GAAAAGCCGG ACAAGGTGAT GGAGTCGAAG
ATCGTCAACG ACGCGGAGGC GTACGTTGAC GGCATCGCCA AAAAGCGCGG CCGCAACGTG
GAACTCGCCA GGCGTATGGT GCGCGACAGC ATCTCGCTCA CCTCGGAGGC TGCGCTGCAG
CAAAGGGTGA TCGACCTGAT CGCCGCCGAC CGGCAGGAGC TTCTGGCCAA GCTGGAAGGG
CGCAAGGTGC TCCGCGGGGG GAAGGAAGTG GTGTTGCATC TCTCCAGAGC CAAGGTGACC
AGCTACGAGA TGGGGACCCG CGACAAGATC CTAGACGCCA TCAGCAACCC GGATGTCGCG
TACATGCTGA TGCTCCTGGG TATGCTGGGG CTCTTTTTCG AGCTCTCAAA CCCGGGGGTG
ATCCTGCCCG GGGTGATCGG CGGGATCTCT TTGCTCCTCT CGTTCTTCGC CTTGCAGACC
CTGCCGGTGA ACTACGCGGG GATCGCCCTG ATACTGCTCG CCATCGTCCT ATTCATCGCG
GAGGTCAAGG TGGTTTCCTA CGGGATGCTC GGGGTGGGGG GGATCGTCTC CATGGTGCTC
GGCTCGCTCA TGCTCTTTCC GTCGCCGGAG CCGTACCTGC GCCTTTCCTG GAGCGTCATC
ATCGCCACGG TGCTCTTAAC CGCAGGGTTC TTCATCGTGG TGGTCGCCAA GGTGGTGCAG
GCACACCGGG AAAAGCCGAT CACCGGGGTG GAGGGGATGC TCGGGGAGGA GGGTGTGGCG
GACAGCGACA TCGACCAGGA GGGAAGGGTG CTGGTGCGGG GCGAGTACTG GAACGCGGTG
AGCGGCGAGC GGATACTCAA AGGGGAGAAG GTGCGGGTGG TGGAGGTAAA GGGACTGCAT
CTTAAAGTCG AAACCATAAA CCGCAAACCA TTAACAAGGA GAACGTCTGA GGAGATCTGA
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| Protein sequence | MKRLLLLALL VLGLVLPMRL FGEQPQVAVI SVRGPINPVT SSYLKQSLEA AGKRGDRLLM
VELDTPGGLD TAMRDAVQAI FASPVPVAVY VTPSGARAAS AGAVIGLSAD VLAMAPGTNI
GAAHPVGLGG EKPDKVMESK IVNDAEAYVD GIAKKRGRNV ELARRMVRDS ISLTSEAALQ
QRVIDLIAAD RQELLAKLEG RKVLRGGKEV VLHLSRAKVT SYEMGTRDKI LDAISNPDVA
YMLMLLGMLG LFFELSNPGV ILPGVIGGIS LLLSFFALQT LPVNYAGIAL ILLAIVLFIA
EVKVVSYGML GVGGIVSMVL GSLMLFPSPE PYLRLSWSVI IATVLLTAGF FIVVVAKVVQ
AHREKPITGV EGMLGEEGVA DSDIDQEGRV LVRGEYWNAV SGERILKGEK VRVVEVKGLH
LKVETINRKP LTRRTSEEI
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