Gene Gbem_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1171 
Symbol 
ID6781151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1363019 
End bp1364089 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID642767158 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002137986 
Protein GI197117559 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGCGA TACGGGGATA CCTGATCAGC CTGCTGCTCG TCGCCGGCGC CACGGCCATT 
TGCGAACTGG TCCGGCCGCA CCTGATCCCC ACCAACATGG TGATGGTGTA CCTCTTGGCT
GTCGTGGCGG CCGCCGCCAA GCTCGGCCGG CGGCCCGCCA TAGCGACGGC CTTTTTCAGC
GTCCTCGCCT TCGACTTCTT CTTTGTTCCC CCCCGGCTCA CCTTCAGCGT CGCGGAGAAG
GAGTACCTGG TCACCTTCCT CGGCTTCTTC GTGGTAGGGG TGATGATAAG CTCGCTGGTC
GCGAAGGTCA GGGAGCAGTC CCTGGAACGC GAGCGGCTCT CGCACGAGGC GGAAAAGGCG
AGGATCCTGC AAGCCCGGGA GAACCTGGAA CGGGCGCTCT TGAATTCCAT CTCGCACGAC
CTCAGGACGC CGCTCGTTTC CATCAAGGGG GCGCTCTCGG CCTTGAAGGA ACAGGGGGGG
CGCCTCTCCC CTGAGGCGCG CCGGGATCTG CTGGAGACGG CAAACGAAGA GGCGGAGCGG
CTGAACCGTT TCGTCGGAAA CCTCCTCGAC CTGAGCCGCC TGGAGGCGGG GGCCCTCCGC
CCGAGGATCG AGCCGTGCGA CCTGCAGGAA CTCATCGGCT GCGCCATCTC GGCCATGGAG
AGCCGGCTTG GGGACCGCAA CGTATCGGTG CAGCTGCCGC AGGGGCTCAC CCTGGTTCCC
TTGGACCTGG TGCTGATGAC CCAGGTACTG GTGAACCTTT TGGACAACGC CAATAAGTAC
GCCCCCGCGC AAGGGAGCAT CGAGGTGGAG GCGCGCGTCG CCGGCGCCTG GCTCTCCTTG
ACCGTCGCCG ATCGGGGCCC GGGGGCGCCT GAAGCGGAAC TCTCCCATAT TTTCGACAAA
TTCCACCGGG TGCAGGTCCC CGAAAAAACC GGTGGAACCG GCCTCGGGCT TTCCATCTGC
AAGGGAATCG TGGAGGCGCA CGGGGGAAGG ATCGCGGCCA GGAACCGCCC GCAGGGGGGG
CTCGCGGTCG AGATCCTTTT GCCGTTGCAG CAAGGAGCAG AGGAGCCATG A
 
Protein sequence
MVAIRGYLIS LLLVAGATAI CELVRPHLIP TNMVMVYLLA VVAAAAKLGR RPAIATAFFS 
VLAFDFFFVP PRLTFSVAEK EYLVTFLGFF VVGVMISSLV AKVREQSLER ERLSHEAEKA
RILQARENLE RALLNSISHD LRTPLVSIKG ALSALKEQGG RLSPEARRDL LETANEEAER
LNRFVGNLLD LSRLEAGALR PRIEPCDLQE LIGCAISAME SRLGDRNVSV QLPQGLTLVP
LDLVLMTQVL VNLLDNANKY APAQGSIEVE ARVAGAWLSL TVADRGPGAP EAELSHIFDK
FHRVQVPEKT GGTGLGLSIC KGIVEAHGGR IAARNRPQGG LAVEILLPLQ QGAEEP