| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0984 |
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| Symbol | |
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| ID | 6780957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1142221 |
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| End bp | 1143240 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642766966 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002137801 |
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| Protein GI | 197117374 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0618208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTTT TCCCCGGCAG GATCTCGAAG AAAACGATCC TGCTTTTTTC ATGCTTGTTC
CTCCTCCTGG TCCAGACCTG CTACGCCACG GACTACGACC AGATATTCAG CGACGCCAAC
GACGCGATGG GAAGCGGAGA TCTCCCTGCC GCCATCGCCA TCCTGCAGAA GGTCAAGCCG
GACCAGGGCG ACGACAGCGG CGCCTTCGTC AGGAGCCGGA TGCAGATAGC GAGGCTTCAG
TTCGCCCTCA AGGACATGAA TGCCGCCAGC GCCAGCGCGA ACGAGGTCCT TGCCCTCTAC
CCCGACAACA GCGAGGCGCT CAACTTCATC GCATCGGTCA AAAAGGAACA GAAGCCGCGC
TACGTAGTCT TCATGGAGGA TTGTCTCCGC TTCCTGCCGC AGCTCTTGAA GGGGGCGGTG
ATGACCATCA CCCTGGTGGT CTGCATCATC GTGATCTCCC CCTTGGGCGG CCTGCTGATA
GCTTTAGGGC GCATCAGCAC CTTTAAGCCT GTCTCCGGAC TCTGCTGGCT CTTCATCTGG
CTCTTCCGAG GCACTCCGCT TCTGCTGCAG CTCTTCTTCA TCTACTACGG CCTTCCGTCT
CTGGGCATCA CCTTCAAACC CTTCACCGCC GCCATCCTGG GGCTGGGCCT CAATTACTCC
GCTTACCTGG GCGAGATCAT CCGCGGCGGC ATTCAGAGCA TAGAGCACGG GCAGATGGAA
GCCGCCAAGG CGATCGGCAT GAGCTACTGG CAGGCGATGC GCCGGGTGGT CATCCCACAG
ACCTACAAGC GGTTGATGCC TCCCATAGGC AACGAGTTCA TAGCGCTCAT CAAGGACACC
GCGCTGGTCT CCACCATCGC CATGGTCGAA CTGATGCGTT CCGCCGACCA GATGTTCAAC
GCCTATTTCA ACGTGACGGC GCTGATTCTG GCCGCGTTCA TCTACCTCCT CTTCACCACC
ATCTTCACCT TCATATTCGA GAAGATCGAG ATCAGGGCCG GCATCTATGA AAACCGCTAA
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| Protein sequence | MRLFPGRISK KTILLFSCLF LLLVQTCYAT DYDQIFSDAN DAMGSGDLPA AIAILQKVKP
DQGDDSGAFV RSRMQIARLQ FALKDMNAAS ASANEVLALY PDNSEALNFI ASVKKEQKPR
YVVFMEDCLR FLPQLLKGAV MTITLVVCII VISPLGGLLI ALGRISTFKP VSGLCWLFIW
LFRGTPLLLQ LFFIYYGLPS LGITFKPFTA AILGLGLNYS AYLGEIIRGG IQSIEHGQME
AAKAIGMSYW QAMRRVVIPQ TYKRLMPPIG NEFIALIKDT ALVSTIAMVE LMRSADQMFN
AYFNVTALIL AAFIYLLFTT IFTFIFEKIE IRAGIYENR
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