Gene Gbem_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0975 
Symbol 
ID6780948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1132216 
End bp1133766 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content57% 
IMG OID642766957 
Productputative PAS/PAC sensor protein 
Protein accessionYP_002137792 
Protein GI197117365 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGC GATTGCGCAT ACTGCATCTA GAGGACGATC CGATGGATGC CGAACTCGTC 
TTGATGGCTC TTACCGCAGA GGGGCTCGAT TGTGAGGTCC AGGTGGTGTC GAGGCGGGAT
GAGTTCGACA AAGCTTTGCA GCGGGGTGGA ATGGACCTCA TTCTTGCCGA CTTTGCGCTC
CCTGCCTTTG ACGGGATGAG CGCCTTGGCG ATGGTCCGGG CCAAGCTTCC TGATCTGCCT
TTCGTCTTTG TCTCAGGCAA GCTTGGTGAA GAGGCGGCGA TTGAGTCCCT TAAAAGCGGC
GCCACCGACT ACGTGCTCAA AAGCAGGTTG TCCAGACTGG GGCCAGCGGT ACAAAGGGCG
CTAACTGAGG CAACGGAGCG CGCGAAGCAA CGCCAAACCG AGAAGGCGCT GGAGGTAGCA
TATGCTGAGA TAGAGAAGCG GGCGGAGGAC TACCGCAACC TCTTCAACAG CATCAGGGAC
GTCATCGTGG TGGCTGACCA CAACCGGACG ATCCTGCATG TCAATCAACC GGCACTCATT
GACACGTTTG GCTACAGCTC CGACGAGGTG GTGGGAGAAA GCAGCATCAT CCTCTACGCG
AATGAGGATG ACTTCCACAG CACCGGAAAA GAAGTATTCG ACGTGGAGGG ACCGGTGGAT
GGAAAACTCA TAGAGCTGAA CTTCCGCAGG AAAGGCGGGG AAGTTTTCAT CGGCGAACTT
TACGCGATGA AAAGGCTGGA CCGGCACGGC GTGGTGACCG GCAACATCTC GATCTTCAGG
GATATCAGCC AGCGCAAGAA AGCTGAGGCA GATCTCAGGG AGAGTGAACT GCGACGCTAC
CAACTGCAAT TGGAACTGGT TTACGCCGCG GAAATCCAGG CAAAACTATT GCCGCGCAGT
TATCCAAATA TCCCCGGTTT TGATGTAAGC GCGAGGTGTC TGCCTGCGAA GCAGGTGGGA
GGGGATTTCT ACGATTGGCA GCAGGTGACC CCCACCGTTT TCAATCTGAC TCTTGGTGAT
GTGATGGGCA AGGGGATGGC GGCGGCCATG CTCATGGCGA CCGTTAGAGC GGCACTTCAT
GCCGTTACGC TGTACAACAC ACCCGCGCCG GCGGTGCACC TGGCGGAAAA GGCGCTCAAC
GAGGATCTGG AGAATTCCGA GAGCTTTGTC ACCCTTTTCC ATGCCCAGCT CGACTCCGTT
ACACGCACCC TTTCCTTCGT CGATTGCGGT CATGGCTATG TCTTTGTCAG GAGAGCCACT
GGCGCGGTGG AGACTCTCTC GCCGAGAGGG CTTCCCCTGG GGGTGCAGGG GGGGGAAGTT
TACCAGGAAG GGAAGGTACA GTTTGAAAAG GGGGATGTGT TTGTTCTTTA CAGCGATGGG
CTCATCGACG CCAACCCGCA GCTCGAGTTG ACCCATGAGA TACTTGCCGG GCAGATTAGA
AGTGAGGAGG GCGCGCTGGA GACTGTGGAT CGGCTCATTG CTCTCACTAG GCAGCCTGAC
CCGCAGCCTG ACGACATAAC CGTACTGGTG GCAAAATTTA ACGGCGACTA A
 
Protein sequence
MTQRLRILHL EDDPMDAELV LMALTAEGLD CEVQVVSRRD EFDKALQRGG MDLILADFAL 
PAFDGMSALA MVRAKLPDLP FVFVSGKLGE EAAIESLKSG ATDYVLKSRL SRLGPAVQRA
LTEATERAKQ RQTEKALEVA YAEIEKRAED YRNLFNSIRD VIVVADHNRT ILHVNQPALI
DTFGYSSDEV VGESSIILYA NEDDFHSTGK EVFDVEGPVD GKLIELNFRR KGGEVFIGEL
YAMKRLDRHG VVTGNISIFR DISQRKKAEA DLRESELRRY QLQLELVYAA EIQAKLLPRS
YPNIPGFDVS ARCLPAKQVG GDFYDWQQVT PTVFNLTLGD VMGKGMAAAM LMATVRAALH
AVTLYNTPAP AVHLAEKALN EDLENSESFV TLFHAQLDSV TRTLSFVDCG HGYVFVRRAT
GAVETLSPRG LPLGVQGGEV YQEGKVQFEK GDVFVLYSDG LIDANPQLEL THEILAGQIR
SEEGALETVD RLIALTRQPD PQPDDITVLV AKFNGD