Gene Gbem_0948 details

Gene Information

• Locus tag: Gbem_0948
• Symbol: rplF
• ID: 6783790
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1104643
• End bp: 1105182
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642766925
• Product: 50S ribosomal protein L6
• Protein accession: YP_002137765
• Protein GI: 197117338
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00150811
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAGAA TAGGAAAACT TCCCATCGCG ATTCCTGCGG GGGTGAAAGT CATATACAAC 
GCCCCGGAGA TCAAGGTGGA GGGCCCGAAA GGGAAACTCG CCCGCAACAT CGGGGAAGGC 
GTCGCCATCG ACGTGACCGC GCAGGCGGTA ACGGTGACCA GGCACGACGA CACCATCAAG 
TCCCGCTCGG CCCATGGCCT GACTAGGACC CTGATCAACA ACATGGTGAT CGGCGTCTCT 
AAAGGGTTCG AGACCCTGCT CGAGATCAAC GGCGTCGGTT ACCGCGCCGA GGTGAAGGGC 
AACGTGCTGA ACCTGGCCCT GGGCTTTTCG CACCCGGTCA ACTTCGAGCT GCCGACCGGC 
ATCACGGTCG AGGTCGAGAA GATGACCAAG CTCAAAGTGA TGGGGATCGA CAAGGAAGTG 
GTCGGCGAGA CCGCCGCCAA GATCCGCGCG TTCCGTCCGC CCGAGCCGTA CAAGGGTAAG 
GGTGTCAAGT ACGCTGACGA AACGATTCTG AGAAAAGCCG GCAAGACCGG TAAAAAATAG 

 

Protein sequence

MSRIGKLPIA IPAGVKVIYN APEIKVEGPK GKLARNIGEG VAIDVTAQAV TVTRHDDTIK 
SRSAHGLTRT LINNMVIGVS KGFETLLEIN GVGYRAEVKG NVLNLALGFS HPVNFELPTG 
ITVEVEKMTK LKVMGIDKEV VGETAAKIRA FRPPEPYKGK GVKYADETIL RKAGKTGKK