Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0939 |
Symbol | rpsC |
ID | 6783781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1101165 |
End bp | 1101800 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642766916 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_002137756 |
Protein GI | 197117329 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0016445 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTCAGA AAGTAAATCC TATCGGGTTC AGACTCGGGG TTATTAAAAC CTGGGATTCG AAATGGTACG CGGAAAAAGA TTATGCAAAG CTTCTTCACG AAGACCTGAA GCTGCGCAAT TTCCTTAAAA AAAGGCTGTA TCATTCGGGC GTCTCCAAGA TCGAGATCGA GCGCGCTGCG GGCAAGGCGA AGATCAACAT CTTCACCGCT CGTCCGGGCC TCATCATCGG TAAGAAGGGC TCGGAGGTCG AGACTCTGAA GAAGGAGCTG GCCAAGCTCA CCGACAAAGA GGTCTACCTT AATATACAGG AAGTCAGGAA GCCCGAGCTG GACGCACAGC TCGTCGCCGA GAACGTGGCC ATGCAGCTGG AGCGCCGTAT CGCGTTCCGC CGTGCCATGA AAAAGAGCGT CACCTCGACG CTCAAGTTCG GCGCCAAGGG TATCAGGATT ACCTGCTCGG GCCGTCTGGG CGGCGCAGAG ATGTCCAGGA CGGAATGGTA CCGCGAGGGA AGGGTGCCGC TGCACACGTT GCGCGCGGAC ATCGACTATG GCTTTGCCGA GGCGAAGACC ACCTACGGGA TCATCGGCGT AAAAGTGCTC CTCTTCAAGG GTGAAGTACT CTCCGCTAAA AAATAG
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Protein sequence | MGQKVNPIGF RLGVIKTWDS KWYAEKDYAK LLHEDLKLRN FLKKRLYHSG VSKIEIERAA GKAKINIFTA RPGLIIGKKG SEVETLKKEL AKLTDKEVYL NIQEVRKPEL DAQLVAENVA MQLERRIAFR RAMKKSVTST LKFGAKGIRI TCSGRLGGAE MSRTEWYREG RVPLHTLRAD IDYGFAEAKT TYGIIGVKVL LFKGEVLSAK K
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