Gene Gbem_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0939 
SymbolrpsC 
ID6783781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1101165 
End bp1101800 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID642766916 
Product30S ribosomal protein S3 
Protein accessionYP_002137756 
Protein GI197117329 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0016445 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTCAGA AAGTAAATCC TATCGGGTTC AGACTCGGGG TTATTAAAAC CTGGGATTCG 
AAATGGTACG CGGAAAAAGA TTATGCAAAG CTTCTTCACG AAGACCTGAA GCTGCGCAAT
TTCCTTAAAA AAAGGCTGTA TCATTCGGGC GTCTCCAAGA TCGAGATCGA GCGCGCTGCG
GGCAAGGCGA AGATCAACAT CTTCACCGCT CGTCCGGGCC TCATCATCGG TAAGAAGGGC
TCGGAGGTCG AGACTCTGAA GAAGGAGCTG GCCAAGCTCA CCGACAAAGA GGTCTACCTT
AATATACAGG AAGTCAGGAA GCCCGAGCTG GACGCACAGC TCGTCGCCGA GAACGTGGCC
ATGCAGCTGG AGCGCCGTAT CGCGTTCCGC CGTGCCATGA AAAAGAGCGT CACCTCGACG
CTCAAGTTCG GCGCCAAGGG TATCAGGATT ACCTGCTCGG GCCGTCTGGG CGGCGCAGAG
ATGTCCAGGA CGGAATGGTA CCGCGAGGGA AGGGTGCCGC TGCACACGTT GCGCGCGGAC
ATCGACTATG GCTTTGCCGA GGCGAAGACC ACCTACGGGA TCATCGGCGT AAAAGTGCTC
CTCTTCAAGG GTGAAGTACT CTCCGCTAAA AAATAG
 
Protein sequence
MGQKVNPIGF RLGVIKTWDS KWYAEKDYAK LLHEDLKLRN FLKKRLYHSG VSKIEIERAA 
GKAKINIFTA RPGLIIGKKG SEVETLKKEL AKLTDKEVYL NIQEVRKPEL DAQLVAENVA
MQLERRIAFR RAMKKSVTST LKFGAKGIRI TCSGRLGGAE MSRTEWYREG RVPLHTLRAD
IDYGFAEAKT TYGIIGVKVL LFKGEVLSAK K