| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0901 |
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| Symbol | lpxC |
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| ID | 6783738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1059490 |
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| End bp | 1060407 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642766873 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_002137718 |
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| Protein GI | 197117291 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.452272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATATTCC AGCAGACCTT GGGCAACAAA GCAACATTCA GCGGCATCGG ACTGCACACG
GGTAAGACCA TTACCCTGAC GCTGCGCCCG GCCGAGGCCG GAACCGGCAT CGTCTTCCAC
AGGGTTGACC TCGCCCCCGC CGTCTCGATC GAGGCGCACG CCTCCAACGT CGTCAACACC
AGGCTCTCCA CCACCATCGG CCGCGGCGAC GCGAGCGTTT CGACCATAGA ACACCTGATG
GCAGCCCTCT ACGGCTGCGG CATCGACAAC GCCCACGTCG ACATTGACGG CCCGGAAGTC
CCGATCATGG ACGGCTCCGC CGCCCCCTTT GTGGCCGCGA TCACCAAGGC CGGGGTTAAG
GTTTCCGGCA AGGCGCGCAA GTACCTCGTG GTTAAGAAAC CGGTGACCGT CGTGGACGGG
GACAAGAAAG CGACCATCAT ACCCTCGCGC CACTACAAGA TCTCCTTCGA CATGCAGTTC
GCCCACCCGG CGGTAAAGAG CCAGTTCCGC TCCCTGGAAT TCAGCCAGGA AAGCTTCATC
GGCGACTTCG CGGCGGCCAG AACCTTCGGC TTTCTGGCCG AGGTGGAGAT GATGAAGTCC
CACGGCCTGG CGCTGGGGGG GTCCTTGGAG AACGCCGTGG TAATCGGCGA TAACGGCGTC
ATCAACCCGG AAGGGCTCAG GTTCCAGGAC GAGTTCGTGC GCCACAAGAT CCTCGACTCC
GTAGGCGACC TCTCCCTCAC CGGCCACCGC CTCATCGGCC ACGTGAAGGC GACCAAGTCG
GGGCACGACC TGAACCACAA GCTGGTCACC GAGCTTTTGA AGCGCCCGGA CTGCTACACG
CTGATCGAGT TCACCCCCCA GGCCTTCAAC GCTCCGTTCA ACATCGGCAT ACCGGAACTC
TCCTGGCTGG AGGCTTAG
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| Protein sequence | MIFQQTLGNK ATFSGIGLHT GKTITLTLRP AEAGTGIVFH RVDLAPAVSI EAHASNVVNT
RLSTTIGRGD ASVSTIEHLM AALYGCGIDN AHVDIDGPEV PIMDGSAAPF VAAITKAGVK
VSGKARKYLV VKKPVTVVDG DKKATIIPSR HYKISFDMQF AHPAVKSQFR SLEFSQESFI
GDFAAARTFG FLAEVEMMKS HGLALGGSLE NAVVIGDNGV INPEGLRFQD EFVRHKILDS
VGDLSLTGHR LIGHVKATKS GHDLNHKLVT ELLKRPDCYT LIEFTPQAFN APFNIGIPEL
SWLEA
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