Gene Gbem_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0896 
Symbol 
ID6783733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1050389 
End bp1051417 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content60% 
IMG OID642766868 
ProductNLP/P60 protein 
Protein accessionYP_002137713 
Protein GI197117286 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000013444 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAT GCGTCAAGCT AATAGCCTTA TGCCTTCTCA TGCTCTCCGT CCCTTCGCTC 
GCCTTCGCTG CCAAGACCCA TCGCGTTAAA AAGCACGAAA CCCTATATTC CCTCGCCAAA
AAGTATCATG TCACCGTTGA AGAACTGAAG GCTGCGAACA ACCTGGTCGG CAACAGCGTG
AAGCCGCGCG TCGTCCTGGT TATCCCCGCC CGCTCCGTTT CCGAGGGAAG AAACGAGACG
GCGTCGAGCG ACGCGACTTA CAAGGTGAAG AAAAGCGAAA GCCTCTCCCG CATCTCGAAG
AAGACCGGCG TGTCCGTGGC GGAGCTGAAG CGCCTGAACG GACTCAGCAG CAGCCGGGTC
AAGGCCGGGA AGGTGCTGGT TCTCAAGGAG AGCGCTCCCG CCGACGAGCC GAAGGTCAAG
GTGGTCAAAA AGCTGCAGCT GCGCCATGGC GACCTTTTCA ACGAGAAAGA TTACGAGCAG
AGCCTTCAGG AGTTGACCGC GCTCGAGCCT GAGCAGCAGG TGGATCTGGC CAAGAACGCC
GAGCTCAAGG TGGACAACCT CAAGGAACTG AAGAAATCCG CCTACGGCTT CCTCGGGACC
CGCTACCGCT TCGGCGGGAG TTCCCGCTCC GGCATCGACT GTTCCAGTTT CGTGCAGCAC
GTGTTCCGCG ACCTCGAGGT CTCCCTGCCG CGCACCGCTC GCGAGCAGTT CGAGGTGGGG
AATGCAGTGG CGCCGGGCGA CCTGCAGAAG GGGGACCTGA TCTTCTTCGC CACCTACGCC
TCCTATCCGT CCCACGTAGG GATCTATCTG GGCAACAACA AGATGATCCA TGCCTCCTCC
CGCGACCGCA GGGTGGTCAT CTCCTCGCTC AACACCTCCT ACTACCGTTC CCGCTTTCTG
GGGGCCAAAA GGATCGCCAA GGTGAATCCG GAAGTGTTCC AACTGGACGA CCTGATCCTG
GGGGTCGAGG AGGAGAGCCC GGAGGAGATG CTGGAAAACG ACTCGCTCGG GTTGACGAGC
AGCAACTAG
 
Protein sequence
MIKCVKLIAL CLLMLSVPSL AFAAKTHRVK KHETLYSLAK KYHVTVEELK AANNLVGNSV 
KPRVVLVIPA RSVSEGRNET ASSDATYKVK KSESLSRISK KTGVSVAELK RLNGLSSSRV
KAGKVLVLKE SAPADEPKVK VVKKLQLRHG DLFNEKDYEQ SLQELTALEP EQQVDLAKNA
ELKVDNLKEL KKSAYGFLGT RYRFGGSSRS GIDCSSFVQH VFRDLEVSLP RTAREQFEVG
NAVAPGDLQK GDLIFFATYA SYPSHVGIYL GNNKMIHASS RDRRVVISSL NTSYYRSRFL
GAKRIAKVNP EVFQLDDLIL GVEEESPEEM LENDSLGLTS SN