| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0822 |
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| Symbol | |
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| ID | 6783660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 973354 |
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| End bp | 975474 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642766796 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_002137641 |
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| Protein GI | 197117214 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGTTA CGGCAAAAAC AAGCAAGAAA AACGCTCCGG CGTACCCCAA GGGGAACACC
TCGCCGCTCG GCGCCACCGT GTCGCACGGA GGCGTCAACT TCAGCGTCTT CGCCAGGGAC
TGCACCGGAG TCGAACTCCT GCTCTTCGAT GCTGCCGACG ACGCCATTCC GTCCCGCGTC
ATCACCCTCG ACCCGCAGCA AAACCGCACC TACCATTACT GGCACGTCTT CGTCCCCGGC
ATAGGAGAAG GGCAGCTTTA CGGCTACCGG GTGGCCGGCC CCTTCGAGCC GCAGCGCGGG
CGCAGGTTCG ATCCCGGCAA GGTCCTGATC GATCCCTACG GCCGCGCCGT CGCGGTCCCC
AAGGGGTACT GCAGGGGCGA CGCCTGCCTC CCCGGGGACA ACGCCGCGAC CGCCATGAAG
AGCGTCGTCG CCGACCCGCG CGACTACGAC TGGGAGGGGG ATCTTCCCCT CAAGCGCCCT
TACTCCAACA CCGTCATCTA CGAGATGCAC GTGGCCGGCT TCACCAAGGA CCCTTCCTCC
GGGGTCTCGA CCGACAAGCG CGGCACCTAC GCCGGGCTCG TGGAGAAGAT CCCCTACTTA
AAGGACCTGG GGGTCACCGC GGTGGAACTG CTGCCGGTGT TCCAATTCGA CCCCCACGAC
GCCCCCTTCG GGCTGGTCAA TTACTGGGGG TACAGCCCCA TCTCCTTCTT CGCCCCCCAT
GCCGGCTTCA GTTCGCGCAC CGAACCGCTG GGACCTCTGG ACGAGTTCCG CGACATGGTG
AAGGCGCTGC ACAAGGCGGG AATAGAGGTG ATCCTCGACG TGGTTTACAA CCACACCTCC
GAGGGGGACC ACAAGGGACC TACCTTCTGC TACCGCGGCT TCGCCAACGA CGTCTACTAT
TCGCTTGCCC CCGACGGGAG CTACATCAAC CACACCGGCT GCGGCAACAC CATGAACGCG
AACCACCACG TGGTGCGCCG GCTCATCATC GACAGCCTGC ACTACTGGGT CAAGGAGATG
CACGTCGACG GCTTCCGTTT CGATCTTGCC TCCATCCTCT CCCGCGACGG CCAGGGGCGC
CCGCTCAAGA ACCCCCCGAT CCTCTGGGAC ATCGAGTCGG ACCCGGCGCT GGCGGGGATC
AAGCTGATCG CCGAGGCGTG GGACGCAGGC GGGCTCTACC AGGTGGGGAG CTTCATCGGC
GACAGCTGGA AGGAGTGGAA CGGGGAGTTC CGCGACGACG TGCGCCGCTT CCTCAAAGGG
GACGAAGGGG TGGTATCCCG TTTCGCGGCA AGGATGCTGG CGAGCCCGGA CATCTACGGG
CACCAGGAGC GCGAACCGGA GCAGAGCATC AACTTCGTCA CCTGCCACGA CGGCTTTACC
CTGAACGACC TGGTCTCCTA CAACAAAAAG CACAACGAGG CCAACGGCGA GTCCAACAGG
GACGGCTCCG ACGCCAACCT GAGCTGGAAC TGCGGCGTCG AGGGGCCTGC CGGCGACCCG
GCGGTCGAGG AACTGCGCAA CCGGCAGGTC AAGAACTTCA TGGCGGTGAC GCTTTTAGCC
CTTGGTACCC CGATGATCCT GATGGGGGAC GAGATGCGGC GCAGCCAGCA GGGTAACAAC
AACGCCTACT GCCAGGACAA CCGCATCGGC TGGTTCGATT GGAGCCTCCA CGAGCGCCAC
GCCGACATTT ACCGCTTCAC CAAGGAGATG ATCAAGGCAA GGCTGATGCA GACCGGCACA
CTGGAGGACG CGCGGACCCT GAGCCAGTTG CTGGGGCAGG CGCGCCTGGA ATGGCACGGG
GTCAACCTCG GGACCCCCGA CTGGAGCCAC GAGTCGCACA GCATTGCCCT GACGGTCTGG
AGCCGCTCCC GCCACGTTGT GTTCCATTAC CTGGTCAATG CATACTGGGA ACCGCTGACC
TTCACGCTTC CACCCCCGCG CAGGCTTGCC GGCGGCACCT GGTACCGCTG GATCGACACC
TCTCTTCCTT CGCCCGACGA CATCGTTCCC TGGGACCTTA CCCCGGCGCA TGCCTCGGGA
AGCTACCAGC TCCCCCCGCG CAGCCTCGTG GTGCTGATCG CTAAGGCGCG CAGTGCCAAA
GGGCGCTCCG CTTCCGACTG A
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| Protein sequence | MKVTAKTSKK NAPAYPKGNT SPLGATVSHG GVNFSVFARD CTGVELLLFD AADDAIPSRV
ITLDPQQNRT YHYWHVFVPG IGEGQLYGYR VAGPFEPQRG RRFDPGKVLI DPYGRAVAVP
KGYCRGDACL PGDNAATAMK SVVADPRDYD WEGDLPLKRP YSNTVIYEMH VAGFTKDPSS
GVSTDKRGTY AGLVEKIPYL KDLGVTAVEL LPVFQFDPHD APFGLVNYWG YSPISFFAPH
AGFSSRTEPL GPLDEFRDMV KALHKAGIEV ILDVVYNHTS EGDHKGPTFC YRGFANDVYY
SLAPDGSYIN HTGCGNTMNA NHHVVRRLII DSLHYWVKEM HVDGFRFDLA SILSRDGQGR
PLKNPPILWD IESDPALAGI KLIAEAWDAG GLYQVGSFIG DSWKEWNGEF RDDVRRFLKG
DEGVVSRFAA RMLASPDIYG HQEREPEQSI NFVTCHDGFT LNDLVSYNKK HNEANGESNR
DGSDANLSWN CGVEGPAGDP AVEELRNRQV KNFMAVTLLA LGTPMILMGD EMRRSQQGNN
NAYCQDNRIG WFDWSLHERH ADIYRFTKEM IKARLMQTGT LEDARTLSQL LGQARLEWHG
VNLGTPDWSH ESHSIALTVW SRSRHVVFHY LVNAYWEPLT FTLPPPRRLA GGTWYRWIDT
SLPSPDDIVP WDLTPAHASG SYQLPPRSLV VLIAKARSAK GRSASD
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